D. Chopera

发表

Uncommon Pathways of Immune Escape Attenuate HIV-1 Integrase Replication Capacity

D. Heckerman, E. Rosenberg, H. Jessen, 2012, Journal of Virology.

Genotypic and Functional Impact of HIV-1 Adaptation to Its Host Population during the North American Epidemic

M. Carrington, B. Walker, J. Fuchs, 2014, PLoS genetics.

Identification of Effective Subdominant Anti-HIV-1 CD8+ T Cells Within Entire Post-infection and Post-vaccination Immune Responses

C. Brander, N. Frahm, A. McMichael, 2015, PLoS pathogens.

Combining Viral Genetics and Statistical Modeling to Improve HIV-1 Time-of-Infection Estimation towards Enhanced Vaccine Efficacy Assessment

Simon A. A. Travers, Lindsay N. Carpp, J. P. Labuschagne, 2019, Viruses.

Intersubtype Differences in the Effect of a Rare p24 Gag Mutation on HIV-1 Replicative Fitness

Jaclyn K. Mann, F. Pereyra, T. Miura, 2012, Journal of Virology.

Early evolution of HLA-associated escape mutations in variable Gag proteins predicts CD4+ decline in HIV-1 subtype C infected women.

C. Gray, S. Karim, N. Garrett, 2017 .

Early evolution of human leucocyte antigen-associated escape mutations in variable Gag proteins predicts CD4+ decline in HIV-1 subtype C-infected women

C. Gray, N. Garrett, C. Williamson, 2017, AIDS.

Temporal Association of HLA-B*81:01- and HLA-B*39:10-Mediated HIV-1 p24 Sequence Evolution with Disease Progression

C. Gray, C. Williamson, S. A. Abdool Karim, 2012, Journal of Virology.

Killer-cell Immunoglobulin-like Receptor (KIR) gene profiles modify HIV disease course, not HIV acquisition in South African women

M. Altfeld, T. Ndung’u, C. Gray, 2015, BMC Infectious Diseases.

Early immune adaptation in HIV-1 revealed by population-level approaches

Todd M. Allen, H. Jessen, T. Allen, 2014, Retrovirology.

A method for killer-cell immunoglobulin-like receptor (KIR) 3DL1/3DS1 genotyping using DNA recovered from frozen plasma.

Z. Brumme, M. Milloy, D. Chopera, 2013, Journal of immunological methods.

No Evidence for Selection of HIV-1 with Enhanced Gag-Protease or Nef Function among Breakthrough Infections in the CAPRISA 004 Tenofovir Microbicide Trial

Jaclyn K. Mann, S. Omarjee, T. Ndung’u, 2013, PloS one.

Oral abstracts of the 21st International AIDS Conference 18–22 July 2016, Durban, South Africa

Michael I. Jordan, Donald A. Jackson, J. G. Ndirangu, 2016, Journal of the International AIDS Society.

African-led health research and capacity building- is it working?

T. Ndung’u, E. Karita, E. Hunter, 2020, BMC Public Health.

Pharmacogenomics Implications of Using Herbal Medicinal Plants on African Populations in Health Transition

N. E. Thomford, M. Skelton, A. Wonkam, 2015, Pharmaceuticals.

In Vitro Reversible and Time-Dependent CYP450 Inhibition Profiles of Medicinal Herbal Plant Extracts Newbouldia laevis and Cassia abbreviata: Implications for Herb-Drug Interactions

A. Maroyi, N. E. Thomford, A. Wonkam, 2016, Molecules.

Inhibition of CYP2B6 by Medicinal Plant Extracts: Implication for Use of Efavirenz and Nevirapine-Based Highly Active Anti-Retroviral Therapy (HAART) in Resource-Limited Settings

N. E. Thomford, M. Skelton, A. Wonkam, 2016, Molecules.

Molecular characterization of XvlNO1, a myo-inositol 1-phosphate synthase gene from Xerophyta viscosa

D. Chopera, 2005 .

Impact of Cytotoxic T Lymphocyte (CTL) escape mutations in acute/Early HIV-1 Subtype C Infection on Disease Progression

D. Chopera, 2009 .

Subtype-Specific Differences in Gag-Protease-Driven Replication Capacity Are Consistent with Intersubtype Differences in HIV-1 Disease Progression

Jaclyn K. Mann, T. Ndung’u, Jeffrey N. Martin, 2017, Journal of Virology.

Fitness Replicative Rare p24 Gag Mutation on HIV-1 Intersubtype Differences in the Effect of a

Jaclyn K. Mann, T. Miura, B. Walker, 2014 .

A Discussion of Molecular Biology Methods for Protein Engineering

Samantha Barichievy, A. Pooran, D. Chopera, 2012, Molecular Biotechnology.

Immune-mediated attenuation of HIV-1.

Z. Brumme, M. Brockman, Zabrina L Brumme, 2011, Future virology.

Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals

C. Gray, C. Williamson, S. A. Abdool Karim, 2011, Journal of Virology.

Transmission of HIV-1 CTL Escape Variants Provides HLA-Mismatched Recipients with a Survival Advantage

Winston A Hide, C. Gray, C. Seoighe, 2008, PLoS pathogens.

Fluidity of HIV-1-Specific T-Cell Responses during Acute and Early Subtype C HIV-1 Infection and Associations with Early Disease Progression

C. Gray, C. Williamson, C. Riou, 2010, Journal of Virology.

Nef-mediated down-regulation of CD4 and HLA class I in HIV-1 subtype C infection: association with disease progression and influence of immune pressure.

Jaclyn K. Mann, B. Walker, S. Omarjee, 2014, Virology.

Magnitude and Kinetics of CD8+ T Cell Activation during Hyperacute HIV Infection Impact Viral Set Point.

K. Shekhar, B. Walker, A. Chakraborty, 2015, Immunity.

Subtle Longitudinal Alterations in Env Sequence Potentiate Differences in Sensitivity to Broadly Neutralizing Antibodies following Acute HIV-1 Subtype C Infection

Jaclyn K. Mann, T. Ndung’u, Z. Ndhlovu, 2022, Journal of virology.

Modulation of HIV reservoirs by host HLA: bridging the gap between vaccine and cure.

Z. Brumme, M. Brockman, D. Chopera, 2012, Current opinion in virology.

crAssphage genomes identified in fecal samples of an adult and infants with evidence of positive genomic selective pressure within tail protein genes.

C. Gray, H. Jaspan, Bryan P. Brown, 2020, Virus research.

crAssphage abundance and genomic selective pressure correlate with altered bacterial abundance in the fecal microbiota of South African mother-infant dyads

C. Gray, H. Jaspan, Bryan P. Brown, 2019, bioRxiv.

Dual HLA B*42 and B*81-reactive T cell receptors recognize more diverse HIV-1 Gag escape variants

Jaclyn K. Mann, T. Ndung’u, Z. Ndhlovu, 2018, Nature Communications.

Early immune adaptation in HIV-1 revealed by population-level approaches

Todd M. Allen, H. Jessen, M. Carrington, 2014, Retrovirology.

Brief Report: Selection of HIV-1 Variants With Higher Transmission Potential by 1% Tenofovir Gel Microbicide

J. Carlson, C. Williamson, S. A. Abdool Karim, 2017, Journal of acquired immune deficiency syndromes.

Fibroblast-Derived Extracellular Matrix Induces Chondrogenic Differentiation in Human Adipose-Derived Mesenchymal Stromal/Stem Cells in Vitro

N. E. Thomford, M. Pepper, C. Dandara, 2016, International journal of molecular sciences.

Exploring the trends in prevalence of human immunodeficiency virus drug resistance in South Africa over the course of the HIV epidemic

D. Chopera, 2018 .

Corrigendum to: Protection mechanisms in the resurrection plant Xerophyta viscosa: cloning, expression, characterisation and role of XvINO1, a gene coding for a myo-inositol 1-phosphate synthase.

S. Mundree, J. Farrant, F. Keller, 2008, Functional plant biology : FPB.

Dual HLA B*42 and B*81-reactive T cell receptors recognize more diverse HIV-1 Gag escape variants

T. Ndung’u, Z. Ndhlovu, D. Muema, 2018, Nature Communications.

Uncommon Pathways of Immune Escape Attenuate HIV-1 Integrase Replication Capacity

D. Heckerman, E. Rosenberg, H. Jessen, 2012, Journal of Virology.