Vladimir A. Ivanisenko

发表

A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression

Vladimir A. Ivanisenko, Pavel Demenkov, Timofey V. Ivanisenko, 2019, BMC Bioinformatics.

Mathematical Model for Suppression of Subgenomic Hepatitis C Virus RNA Replication in Cell Culture

Vladimir A. Ivanisenko, Elena L. Mishchenko, Nikolay A. Kolchanov, 2007, J. Bioinform. Comput. Biol..

Integrative Analysis of Co-Morbid Multifactorial Diseases

Ralf Hofestädt, Vladimir A. Ivanisenko, 2018, J. Integr. Bioinform..

ANDSystem: an Associative Network Discovery System for automated literature mining in the field of biology

Vladimir A. Ivanisenko, Pavel Demenkov, Timofey V. Ivanisenko, 2015, BMC Systems Biology.

PDBSite: a database of the 3D structure of protein functional sites

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Dmitry A. Grigorovich, 2004, Nucleic Acids Res..

Prediction and 3D visualization of biological networks using cytological disease mapping

Ralf Hofestädt, Vladimir A. Ivanisenko, Björn Sommer, 2012 .

Finding biomarkers in non-model species: literature mining of transcription factors involved in bovine embryo development

Vladimir A. Ivanisenko, Nikolay Yudin, Evgeny S. Tiys, 2012, BioData Mining.

PDBSiteScan: a program for searching for active, binding and posttranslational modification sites in the 3D structures of proteins

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Dmitry A. Grigorovich, 2004, Nucleic Acids Res..

Molecular association of pathogenetic contributors to pre-eclampsia (pre-eclampsia associome)

Vladimir A. Ivanisenko, Pavel Demenkov, Timofey V. Ivanisenko, 2015, BMC Systems Biology.

Text Mining on PubMed

Vladimir A. Ivanisenko, Pavel Demenkov, Timofey V. Ivanisenko, 2014, Approaches in Integrative Bioinformatics.

Analysis of Protein Functional Site Distribution on Gene Structure

Vladimir A. Ivanisenko, Pavel Demenkov, Nikolay A. Kolchanov, 2007, BIOCOMP.

A study of structural properties of gene network graphs for mathematical modeling of integrated mosaic gene networks

Vladimir A. Ivanisenko, Olga V. Petrovskaya, Evgeny D. Petrovskiy, 2017, J. Bioinform. Comput. Biol..

Permanent proteins in the urine of healthy humans during the Mars-500 experiment

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Evgeny S. Tiys, 2015, J. Bioinform. Comput. Biol..

Molecular Relationships between Bronchial Asthma and Hypertension as Comorbid Diseases

Ralf Hofestädt, Vladimir A. Ivanisenko, Olga V. Saik, 2018, J. Integr. Bioinform..

Visualization and Analysis of a Cardio Vascular Disease- and MUPP1-related Biological Network combining Text Mining and Data Warehouse Approaches

Ralf Hofestädt, Vladimir A. Ivanisenko, Pavel Demenkov, 2010, J. Integr. Bioinform..

GenCoNet – A Graph Database for the Analysis of Comorbidities by Gene Networks

Ralf Hofestädt, Vladimir A. Ivanisenko, Alban Shoshi, 2018, J. Integr. Bioinform..

ANDVisio: A new tool for graphic visualization and analysis of literature mined associative gene networks in the ANDSystem

Vladimir A. Ivanisenko, Pavel Demenkov, Timofey V. Ivanisenko, 2012, Silico Biol..

Evaluation and Visualization of Pathway Efficiency based on Subcellular Protein Localizations (Workshop Abstract)

Ralf Hofestädt, Vladimir A. Ivanisenko, Björn Sommer, 2014 .

WebProAnalyst: an interactive tool for analysis of quantitative structure–activity relationships in protein families

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Alexey M. Eroshkin, 2005, Nucleic Acids Res..

Fastprot: A Computational Workbench for Recognition of the Structural and Functional Determinants in Protein Tertiary Structures

Vladimir A. Ivanisenko, D. A. Grigorovich, S. S. Pintus, 2006 .

Search for New Candidate Genes Involved in the Comorbidity of Asthma and Hypertension Based on Automatic Analysis of Scientific Literature

Ralf Hofestädt, Vladimir A. Ivanisenko, Pavel Demenkov, 2018, J. Integr. Bioinform..

Enhanced Differential Evolution Entirely Parallel Method for Biomedical Applications

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Maria Samsonova, 2013, PaCT.

shRNA-Induced Knockdown of a Bioinformatically Predicted Target IL10 Influences Functional Parameters in Spontaneously Hypertensive Rats with Asthma

Ralf Hofestädt, Vladimir A. Ivanisenko, Elena Yu. Bragina, 2018, J. Integr. Bioinform..

Phylogenetic Analysis of the p53 and p63/p73 Gene Families

Vladimir A. Ivanisenko, Sergey S. Pintus, Eduard S. Fomin, 2007, Silico Biol..

SitEx: a computer system for analysis of projections of protein functional sites on eukaryotic genes

Vladimir A. Ivanisenko, Pavel Demenkov, Nikolay A. Kolchanov, 2012, Nucleic Acids Res..

Subcellular Localization Charts: a New Visual Methodology for the Semi-Automatic Localization of protein-Related Data Sets

Ralf Hofestädt, Vladimir A. Ivanisenko, Pavel Demenkov, 2013, J. Bioinform. Comput. Biol..

SITEX 2.0: Projections of protein functional sites on eukaryotic genes. Extension with orthologous genes

Vladimir A. Ivanisenko, Pavel Demenkov, Irina Medvedeva, 2017, J. Bioinform. Comput. Biol..

A New Stochastic Model for Subgenomic Hepatitis C Virus Replication Considers Drug Resistant Mutants

Vladimir A. Ivanisenko, Elena L. Mishchenko, Lars Kaderali, 2014, PloS one.

A fast genetic algorithm for RNA secondary structure analysis

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, I. I. Titov, 2002 .

Insights into pathophysiology of dystropy through the analysis of gene networks: an example of bronchial asthma and tuberculosis

Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Evgeny S. Tiys, 2014, Immunogenetics.

Novel candidate genes important for asthma and hypertension comorbidity revealed from associative gene networks

Vladimir A. Ivanisenko, Timofey V. Ivanisenko, Olga V. Saik, 2018, BMC Medical Genomics.

Detection of Renal Tissue and Urinary Tract Proteins in the Human Urine after Space Flight

Vladimir A. Ivanisenko, Evgeny S. Tiys, Irina M. Larina, 2013, PloS one.