Kliment Olechnovič

发表

Estimation of model accuracy in CASP13

Arne Elofsson, Karolis Uziela, Björn Wallner, 2019, Proteins.

In Silico Modeling of Inhibitor Binding to Carbonic Anhydrases

Vytautas Raškevičius, V. Kairys, D. Matulis, 2019, Carbonic Anhydrase as Drug Target.

Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment

Č. Venclovas, K. Fidelis, J. Moult, 2021, Proteins.

Comparative analysis of methods for evaluation of protein models against native structures

Kliment Olechnovic, Ceslovas Venclovas, Andriy Kryshtafovych, 2018, Bioinform..

Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment

Jeffrey J. Gray, Panagiotis I. Koukos, Johnathan D. Guest, 2021, Proteins.

Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment

Elodie Laine, Alessandra Carbone, Adam Liwo, 2019, Proteins.

Prediction of protein assemblies by structure sampling followed by interface-focused scoring

Č. Venclovas, J. Dapkūnas, Kliment Olechnovič, 2023, bioRxiv.

VoroMQA: Assessment of protein structure quality using interatomic contact areas

Kliment Olechnovič, Česlovas Venclovas, Č. Venclovas, 2017, Proteins.

CAD‐score: A new contact area difference‐based function for evaluation of protein structural models

Kliment Olechnovič, Eleonora Kulberkytė, Ceslovas Venclovas, 2013, Proteins.

TemStaPro: protein thermostability prediction using sequence representations from protein language models

G. Gasiunas, D. Kazlauskas, Kliment Olechnovič, 2023, bioRxiv.

Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study

Charles W Christoffer, H. Wolfson, O. Schueler‐Furman, 2023, Proteomics.

Template‐based modeling of diverse protein interactions in CAPRI rounds 38‐45

Kliment Olechnovič, Česlovas Venclovas, Visvaldas Kairys, 2019, Proteins.

VoroMQA web server for assessing three-dimensional structures of proteins and protein complexes

Kliment Olechnovic, Ceslovas Venclovas, Č. Venclovas, 2019, Nucleic Acids Res..

Voronota: A fast and reliable tool for computing the vertices of the Voronoi diagram of atomic balls

Kliment Olechnovic, Ceslovas Venclovas, Č. Venclovas, 2014, J. Comput. Chem..

Modeling of protein complexes in CAPRI Round 37 using template‐based approach combined with model selection

Kliment Olechnovič, Česlovas Venclovas, Justas Dapkūnas, 2018, Proteins.

VoroCNN: Deep convolutional neural network built on 3D Voronoi tessellation of protein structures

Kliment Olechnovic, Sergei Grudinin, Ilia Igashov, 2020, bioRxiv.

Modeling of protein complexes in CASP14 with emphasis on the interaction interface prediction

Kliment Olechnovič, Česlovas Venclovas, Justas Dapkunas, 2021, Proteins.

The CAD-score web server: contact area-based comparison of structures and interfaces of proteins, nucleic acids and their complexes

Kliment Olechnovic, Ceslovas Venclovas, Č. Venclovas, 2014, Nucleic Acids Res..

The PPI3D web server for searching, analyzing and modeling protein‐protein interactions in the context of 3D structures

Kliment Olechnovic, Mindaugas Margelevicius, Ceslovas Venclovas, 2016, Bioinform..

Structural modeling of protein complexes: Current capabilities and challenges

Kliment Olechnovič, Česlovas Venclovas, Justas Dapkūnas, 2019, Proteins.

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Johnathan D. Guest, Adam K. Sieradzan, Charles W Christoffer, 2023, Proteins.