Rajashree Roy

发表

Predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning

Jianlin Cheng, Randal Halfmann, Farhan Quadir, 2020, bioRxiv.

DRLComplex: Reconstruction of protein quaternary structures using deep reinforcement learning

Jianlin Cheng, Alex Morehead, Farhan Quadir, 2022, ArXiv.

Deep learning for reconstructing protein structures from cryo-EM density maps: recent advances and future directions

Jianlin Cheng, Rajashree Roy, Nabin Giri, 2022, Current opinion in structural biology.

Covalently Interconnected Layers in g-C3N4: Toward High Mechanical Stability, Catalytic Efficiency and Sustainability

Arunandan Kumar, Sanjit Mondal, Lipipuspa Sahoo, 2022, Applied Catalysis B: Environmental.

A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers

Jianlin Cheng, Rajashree Roy, Elham Soltanikazemi, 2021, bioRxiv.

DeepComplex: A Web Server of Predicting Protein Complex Structures by Deep Learning Inter-chain Contact Prediction and Distance-Based Modelling

Jianlin Cheng, Farhan Quadir, Rajashree Roy, 2021, Frontiers in Molecular Biosciences.

Distance‐based reconstruction of protein quaternary structures from inter‐chain contacts

Jianlin Cheng, Farhan Quadir, Rajashree Roy, 2021, bioRxiv.

DNCON2_Inter: predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learning

Jianlin Cheng, Randal Halfmann, Farhan Quadir, 2021, Scientific Reports.

Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment

Jeffrey J. Gray, Panagiotis I. Koukos, Johnathan D. Guest, 2021, Proteins.

High-Performance Deep Learning Toolbox for Genome-Scale Prediction of Protein Structure and Function

Jianlin Cheng, Ada Sedova, Jeffrey Skolnick, 2021, Workshop on Machine Learning in High Performance Computing Environments.

A deep reinforcement learning approach to reconstructing quaternary structures of protein dimers through self-learning

Jianlin Cheng, Rajashree Roy, Elham Soltanikazemi, 2022, bioRxiv.

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Johnathan D. Guest, Adam K. Sieradzan, Charles W Christoffer, 2023, Proteins.

Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15

Jianlin Cheng, Chen Chen, Tianqi Wu, 2023, bioRxiv.

Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15

Tianqi Wu, Zhiye Guo, Chen Chen, 2023, Communications biology.

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

Jianlin Cheng, Chen Chen, Tianqi Wu, 2023, bioRxiv.