Christopher J. Oldfield

发表

Development of New Predictors of Intrinsically Disordered Proteins and Residues

Wei-Lun Hsu, Vladimir N. Uversky, Bin Xue, 2010 .

Identification of Intrinsic Disorder in Complexes from the Protein Data Bank

Jianhong Zhou, Bairong Shen, Fei Huang, 2018, 2018 IEEE 8th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS).

MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins

Lukasz A. Kurgan, Bin Xue, A. Keith Dunker, 2012, Bioinform..

Intrinsic Disorder Is a Common Feature of Hub Proteins from Four Eukaryotic Interactomes

Lilia M. Iakoucheva, Predrag Radivojac, Fei Ji, 2006, PLoS Comput. Biol..

Quality assessment for the putative intrinsic disorder in proteins

Chen Wang, Lukasz A. Kurgan, Gang Hu, 2018, Bioinform..

Disordered Function Conjunction: On the In-Silico Function Annotation of Intrinsically DisorderedRegions

Lukasz Kurgan, Christopher J. Oldfield, Sina Ghadermarzi, 2019, PSB.

Subclassifying Disordered Proteins by the CH-CDF Plot Method

Fei Huang, Bin Xue, A. Keith Dunker, 2011, Pacific Symposium on Biocomputing.

Disease-Associated Mutations Disrupt Functionally Important Regions of Intrinsic Protein Disorder

Vladimir Vacic, Lilia M. Iakoucheva, Chad Haynes, 2012, PLoS Comput. Biol..

Intrinsically Disordered Proteins: An Update

Zoran Obradovic, Jack Y. Yang, A. Keith Dunker, 2007, 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering.

Supplement for article entitled "MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning bind- ing regions in proteins"

Lukasz Kurgan, Vladimir N. Uversky, Christopher J. Oldfield, 2005 .

Intrinsically Disordered Proteins: Predictions and Applications.

Zoran Obradovic, A. Keith Dunker, Vladimir N. Uversky, 2007 .

Intrinsic Protein Disorder and Protein-Protein Interactions

Fei Huang, Bin Xue, A. Keith Dunker, 2012, Pacific Symposium on Biocomputing.

Malleable Machines in Transcription Regulation: The Mediator Complex

István Simon, A. Keith Dunker, Vladimir N. Uversky, 2008, PLoS Comput. Biol..

Archaic chaos: intrinsically disordered proteins in Archaea

Bin Xue, Robert W. Williams, A. Keith Dunker, 2010, BMC Systems Biology.

Intrinsic Disorder in Protein-Protein Interaction Networks: Case Studies of Complexes Involving p53 and 14-3-3

Jack Y. Yang, A. Keith Dunker, Vladimir N. Uversky, 2007, BIOCOMP.

Erratum to: Improving protein order-disorder classification using charge-hydropathy plots

Li Shen, Fei Huang, Bin Xue, 2015, BMC Bioinformatics.

Intrinsic protein disorder and protein-protein interactions.

Wei-Lun Hsu, Vladimir N. Uversky, Christopher J. Oldfield, 2011, PSB 2011.

Mining α-Helix-Forming Molecular Recognition Features with Cross Species Sequence Alignments†

A. Keith Dunker, Vladimir N. Uversky, Christopher J. Oldfield, 2007 .

Sub-classifying disordered proteins by the CH-CDF plot method

A. Keith Dunker, Wei-Lun Hsu, Vladimir N. Uversky, 2012 .

A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome

Lukasz Kurgan, Zhenling Peng, A. Keith Dunker, 2013, Cellular and Molecular Life Sciences.

DisProt 7.0: a major update of the database of disordered proteins

Sonia Longhi, Silvio C. E. Tosatto, Arne Elofsson, 2016, Nucleic Acids Res..

Improving protein order-disorder classification using charge-hydropathy plots

Fei Huang, A. Keith Dunker, Wei-Lun Hsu, 2014, BMC bioinformatics.

Close encounters of the third kind: disordered domains and the interactions of proteins

Monika Fuxreiter, Peter Tompa, A. Keith Dunker, 2009, BioEssays : news and reviews in molecular, cellular and developmental biology.

Calorimetry and Thermodynamics in Drug Design

Christopher J. Oldfield, Robert L. Baldwin, R. L. Baldwin, 2008 .

DescribePROT: database of amino acid-level protein structure and function predictions

A Keith Dunker, Zoran Obradovic, Lukasz Kurgan, 2020, Nucleic Acids Res..

Coupled folding and binding with α-helix-forming molecular recognition elements

Marc S. Cortese, Christopher J. Oldfield, P. Romero, 2005 .

Protein intrinsic disorder and induced pluripotent stem cells.

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2012, Molecular bioSystems.

Intrinsic disorder in transcription factors.

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2006, Biochemistry.

Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2005, Journal of molecular recognition : JMR.

Intrinsically disordered proteins and multicellular organisms.

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2015, Seminars in cell & developmental biology.

Intrinsically disordered proteins and intrinsically disordered protein regions.

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2014, Annual review of biochemistry.

Intrinsically disordered protein.

Christopher J. Oldfield, K. W. Hipps, C. Brown, 2001, Journal of molecular graphics & modelling.

Evolutionary Rate Heterogeneity in Proteins with Long Disordered Regions

Christopher J. Oldfield, Christopher J. Williams, C. Oldfield, 2002, Journal of Molecular Evolution.

Intrinsic disorder and functional proteomics.

Christopher J. Oldfield, L. Iakoucheva, P. Radivojac, 2007, Biophysical journal.

Comparing and combining predictors of mostly disordered proteins.

Marc S. Cortese, Christopher J. Oldfield, A. Dunker, 2005, Biochemistry.

Intrinsically disordered proteins in human diseases: introducing the D2 concept.

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2008, Annual review of biophysics.

Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms.

A Keith Dunker, Zoran Obradovic, Predrag Radivojac, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Intrinsic Disorder in Human RNA-binding Proteins.

Christopher J. Oldfield, Lukasz Kurgan, C. Oldfield, 2021, Journal of molecular biology.

Classification of Intrinsically Disordered Regions and Proteins

Christopher J. Oldfield, Philip M. Kim, Robert J. Weatheritt, 2014, Chemical reviews.

Exploring the binding diversity of intrinsically disordered proteins involved in one‐to‐many binding

Christopher J. Oldfield, P. Romero, A. Dunker, 2013, Protein science : a publication of the Protein Society.

Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions.

A Keith Dunker, Zoran Obradovic, Slobodan Vucetic, 2007, Journal of proteome research.

The unfoldomics decade: an update on intrinsically disordered proteins

Christopher J. Oldfield, Jack Y. Yang, V. Vacic, 2008, BMC Genomics.

Intrinsically Disordered Proteome of Human Membrane‐Less Organelles

Christopher J Oldfield, Christopher J. Oldfield, Vladimir N Uversky, 2018, Proteomics.

Unfoldomics of human diseases: linking protein intrinsic disorder with diseases

A Keith Dunker, Zoran Obradovic, Slobodan Vucetic, 2009, BMC Genomics.

Understanding COVID-19 via comparative analysis of dark proteomes of SARS-CoV-2, human SARS and bat SARS-like coronaviruses

Christopher J. Oldfield, C. Oldfield, V. Uversky, 2020, Cellular and Molecular Life Sciences.

Understanding COVID-19 via comparative analysis of dark proteomes of SARS-CoV-2, human SARS and bat SARS-like coronaviruses

Christopher J. Oldfield, V. Uversky, Rajanish Giri, 2020, Cellular and Molecular Life Sciences.

Protein disorder in the human diseasome: unfoldomics of human genetic diseases

A Keith Dunker, Zoran Obradovic, Christopher J Oldfield, 2009, BMC Genomics.

Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

Christopher J. Oldfield, L. Iakoucheva, S. Vucetic, 2007, Journal of proteome research.

The C-terminal domain of measles virus nucleoprotein belongs to the class of intrinsically disordered proteins that fold upon binding to their physiological partner.

Sonia Longhi, Christopher J Oldfield, Christopher J. Oldfield, 2004, Virus research.

Do viral proteins possess unique biophysical features?

Christopher J. Oldfield, Dan S. Tawfik, C. Oldfield, 2009, Trends in biochemical sciences.

Accuracy of protein-level disorder predictions

Lukasz Kurgan, Christopher J Oldfield, Christopher J. Oldfield, 2020, Briefings Bioinform..

Intrinsically disordered proteins in molecular recognition and structural proteomics

Christopher J. Oldfield, C. Oldfield, 2014 .

Binding promiscuity of unfolded peptides

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2012 .

CDF it all: Consensus prediction of intrinsically disordered proteins based on various cumulative distribution functions

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2009, FEBS letters.

Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners

Christopher J. Oldfield, Jack Y. Yang, A. Dunker, 2008, BMC Genomics.

Characterization of molecular recognition features, MoRFs, and their binding partners.

A Keith Dunker, Vladimir Vacic, Predrag Radivojac, 2007, Journal of proteome research.

Rational drug design via intrinsically disordered protein.

Marc S. Cortese, Christopher J. Oldfield, P. Romero, 2006, Trends in biotechnology.

Prediction of Intrinsic Disorder with Quality Assessment Using QUARTER.

Gang Hu, Zhonghua Wu, Lukasz Kurgan, 2020, Methods in molecular biology.

Introduction to intrinsically disordered proteins and regions

Christopher J. Oldfield, A. Dunker, Lukasz Kurgan, 2019, Intrinsically Disordered Proteins.

Mining α -helix-forming molecular recognition features ( α -MoRFs) with cross species sequence alignments †

Christopher J. Oldfield, P. Romero, A. Dunker, 2008 .

Unfoldomics of human genetic diseases: illustrative examples of ordered and intrinsically disordered members of the human diseasome.

A Keith Dunker, Zoran Obradovic, Christopher J Oldfield, 2009, Protein and peptide letters.

Analysis of molecular recognition features (MoRFs).

Marc S. Cortese, Christopher J. Oldfield, V. Vacic, 2006, Journal of molecular biology.

Utilization of protein intrinsic disorder knowledge in structural proteomics.

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2013, Biochimica et biophysica acta.

N-terminal Domains of DELLA Proteins Are Intrinsically Unstructured in the Absence of Interaction with GID1/Gibberellic Acid Receptors*

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2010, The Journal of Biological Chemistry.

When Darkness Becomes a Ray of Light in the Dark Times: Understanding the COVID-19 via the Comparative Analysis of the Dark Proteomes of SARS-CoV-2, Human SARS and Bat SARS-Like Coronaviruses

Christopher J. Oldfield, C. Oldfield, V. Uversky, 2020 .

Viral disorder or disordered viruses: do viral proteins possess unique features?

Christopher J Oldfield, Christopher J. Oldfield, Vladimir N Uversky, 2010, Protein and peptide letters.

Improving protein order-disorder classification using charge-hydropathy plots

Christopher J. Oldfield, Fei Huang, P. Romero, 2014, BMC Bioinformatics.

Addressing the intrinsic disorder bottleneck in structural proteomics

Christopher J. Oldfield, A. Dunker, Y. Cheng, 2005, Proteins.

Mining alpha-helix-forming molecular recognition features with cross species sequence alignments.

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2007, Biochemistry.

Coupled folding and binding with alpha-helix-forming molecular recognition elements.

Marc S. Cortese, Christopher J. Oldfield, P. Romero, 2005, Biochemistry.

Evidence for a Strong Correlation Between Transcription Factor Protein Disorder and Organismic Complexity

Christopher J. Oldfield, K. Niklas, A. Dunker, 2017, Genome biology and evolution.

Back to the Future: Nuclear Magnetic Resonance and Bioinformatics Studies on Intrinsically Disordered Proteins.

Christopher J. Oldfield, A. Dunker, C. Oldfield, 2015, Advances in experimental medicine and biology.

Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins.

Christopher J. Oldfield, L. Iakoucheva, S. Vucetic, 2007, Journal of proteome research.

Protein intrinsic disorder and human papillomaviruses: increased amount of disorder in E6 and E7 oncoproteins from high risk HPVs.

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2006, Journal of proteome research.

Predicting Functions of Disordered Proteins with MoRFpred.

Lukasz Kurgan, Christopher J Oldfield, Christopher J. Oldfield, 2018, Methods in molecular biology.