Noah A. Rosenberg

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Coalescent Histories for Lodgepole Species Trees

Filippo Disanto, Noah A. Rosenberg, N. Rosenberg, 2015, J. Comput. Biol..

ADZE: a rarefaction approach for counting alleles private to combinations of populations

Noah A. Rosenberg, Zachary A. Szpiech, Mattias Jakobsson, 2008, Bioinform..

Coalescent consequences for consensus cladograms

Noah A. Rosenberg, David Bryant, James H. Degnan, 2007 .

Haplotype Allele Frequency (HAF) Score: Predicting Carriers of Ongoing Selective Sweeps Without Knowledge of the Adaptive Allele

Noah A. Rosenberg, Vineet Bafna, Glenn Tesler, 2015, RECOMB.

iGLASS: An Improvement to the GLASS Method for Estimating Species Trees from Gene Trees

Noah A. Rosenberg, Ethan M. Jewett, N. Rosenberg, 2012, J. Comput. Biol..

Asymptotic Properties of the Number of Matching Coalescent Histories for Caterpillar-Like Families of Species Trees

Filippo Disanto, Noah A. Rosenberg, N. Rosenberg, 2015, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Algorithms for Selecting Informative Marker Panels for Population Assignment

Noah A. Rosenberg, 2005, J. Comput. Biol..

CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

Noah A. Rosenberg, Mattias Jakobsson, M. Jakobsson, 2007, Bioinform..

An analytical upper bound on the number of loci required for all splits of a species tree to appear in a set of gene trees

Tandy J. Warnow, Noah A. Rosenberg, Lawrence H. Uricchio, 2016, BMC Bioinformatics.

Network-based hierarchical population structure analysis for large genomic data sets

Noah A. Rosenberg, Alan R. Templeton, Amir Rubin, 2019, bioRxiv.

On the Number of Ranked Species Trees Producing Anomalous Ranked Gene Trees

Filippo Disanto, Noah A. Rosenberg, N. Rosenberg, 2014, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A Characterization of the Set of Species Trees that Produce Anomalous Ranked Gene Trees

Noah A. Rosenberg, Tanja Stadler, James H. Degnan, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Phylogenomics and population genomics: Moddels, algorithms, and analytical tools

Noah A. Rosenberg, Luay Nakhleh, Tandy Warnow, 2012, PSB 2012.

Roadblocked monotonic paths and the enumeration of coalescent histories for non-matching caterpillar gene trees and species trees

Noah A. Rosenberg, Zoe M. Himwich, N. Rosenberg, 2019, Adv. Appl. Math..

Mathematical Properties of the Deep Coalescence Cost

Noah A. Rosenberg, Cuong V. Than, N. Rosenberg, 2013, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Consistency Properties of Species Tree Inference by Minimizing Deep Coalescences

Noah A. Rosenberg, Cuong V. Than, N. Rosenberg, 2011, J. Comput. Biol..

Improvements to a Class of Distance Matrix Methods for Inferring Species Trees from Gene Trees

Noah A. Rosenberg, Ethan M. Jewett, Laura J. Helmkamp, 2012, J. Comput. Biol..

Counting Coalescent Histories

Noah A. Rosenberg, N. Rosenberg, 2007, J. Comput. Biol..

The Behavior of Admixed Populations in Neighbor-Joining Inference of Population Trees

Olivier Gascuel, Noah A. Rosenberg, Lewi Stone, 2012, Pacific Symposium on Biocomputing.

Enumeration of Ancestral Configurations for Matching Gene Trees and Species Trees

Filippo Disanto, Noah A. Rosenberg, N. Rosenberg, 2016, J. Comput. Biol..

Mean deep coalescence cost under exchangeable probability distributions

Noah A. Rosenberg, Cuong V. Than, N. Rosenberg, 2014, Discret. Appl. Math..

Coalescent Histories for Caterpillar-Like Families

Noah A. Rosenberg, N. Rosenberg, 2013, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

On the Colijn-Plazzotta numbering scheme for unlabeled binary rooted trees

Noah A. Rosenberg, N. Rosenberg, 2020, bioRxiv.

Enumeration of coalescent histories for caterpillar species trees and p-pseudocaterpillar gene trees

Noah A. Rosenberg, Egor Alimpiev, N. Rosenberg, 2021, Adv. Appl. Math..

Enumeration of binary trees compatible with a perfect phylogeny

Filippo Disanto, Noah A. Rosenberg, Anand Bhaskar, 2021, Journal of mathematical biology.

Demographic History of European Populations of Arabidopsis thaliana

Noah A. Rosenberg, Mattias Jakobsson, Olivier François, 2008, PLoS genetics.

Predicting Carriers of Ongoing Selective Sweeps Without Knowledge of the Favored Allele

Noah A. Rosenberg, Vineet Bafna, Glenn Tesler, 2015 .

Probability Models for DNA Sequence Evolution

Noah A. Rosenberg, 2004 .

Enumeration of compact coalescent histories for matching gene trees and species trees

Filippo Disanto, Noah A. Rosenberg, N. Rosenberg, 2019, Journal of mathematical biology.

A Quantitative Comparison of the Similarity between Genes and Geography in Worldwide Human Populations

Noah A. Rosenberg, Chaolong Wang, Sebastian Zöllner, 2012, PLoS genetics.

A General Mechanistic Model for Admixture Histories of Hybrid Populations

Noah A. Rosenberg, N. Rosenberg, P. Verdu, 2011, Genetics.

Genealogical trees, coalescent theory and the analysis of genetic polymorphisms

Noah A. Rosenberg, N. Rosenberg, M. Nordborg, 2002, Nature Reviews Genetics.

AABC: approximate approximate Bayesian computation when simulating a large number of data sets is computationally infeasible

Noah A. Rosenberg, Erkan O. Buzbas, N. Rosenberg, 2013, 1301.6282.

Geographic Sampling Scheme as a Determinant of the Major Axis of Genetic Variation in Principal Components Analysis

Noah A. Rosenberg, Michael DeGiorgio, N. Rosenberg, 2012, Molecular biology and evolution.

Population Structure in a Comprehensive Genomic Data Set on Human Microsatellite Variation

Noah A. Rosenberg, Michael DeGiorgio, Trevor J. Pemberton, 2013, G3: Genes, Genomes, Genetics.

The Relationship Between FST and the Frequency of the Most Frequent Allele

Noah A. Rosenberg, Mattias Jakobsson, Michael D. Edge, 2013, Genetics.

Microsatellite evolution in modern humans: a comparison of two data sets from the same populations

Li Jin, Noah A. Rosenberg, Marcus W. Feldman, 2000 .

The Mean and Variance of the Numbers of r-Pronged Nodes and r-Caterpillars in Yule-Generated Genealogical Trees

Noah A. Rosenberg, N. Rosenberg, 2006 .

A Coalescent Model for Genotype Imputation

Noah A. Rosenberg, Ethan M. Jewett, Sebastian Zöllner, 2012, Genetics.

Applications of population genetics to the search for disease genes

Noah A. Rosenberg, Prakash Gorroochurn, Michael D. Edge, 2013 .

A General Population-Genetic Model for the Production by Population Structure of Spurious Genotype–Phenotype Associations in Discrete, Admixed or Spatially Distributed Populations

Noah A. Rosenberg, N. Rosenberg, M. Nordborg, 2006, Genetics.