Steven N. Hart

发表

Computational performance and accuracy of Sentieon DNASeq variant calling workflow

Mikel Hernaez, Katherine Kendig, Saurabh Baheti, 2018, bioRxiv.

Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4

Ravishankar K. Iyer, Saurabh Baheti, Travis M. Drucker, 2019, BMC Bioinformatics.

PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data

Jared Evans, Steven N. Hart, Naresh Prodduturi, 2014, Bioinform..

Robust Hierarchical Density Estimation and Regression for Re-stained Histological Whole Slide Image Co-registration

Steven N. Hart, Nicholas B. Larson, Naresh Prodduturi, 2019 .

Harnessing Big Data for Precision Medicine: Infrastructures and Applications

Steven N. Hart, Michael Snyder, Stephen C. J. Parker, 2017, PSB.

Comprehensive annotation of BRCA1 and BRCA2 missense variants by functionally validated sequence-based computational prediction models

Steven N. Hart, David E. Goldgar, Tanya L. Hoskin, 2017 .

Will Digital Pathology be as Disruptive as Genomics?

Steven N. Hart, 2018, Journal of pathology informatics.

VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files

Steven N. Hart, Jean-Pierre A. Kocher, Patrick H. Duffy, 2015, Briefings Bioinform..

The Biological Reference Repository (BioR): a rapid and flexible system for genomics annotation

Steven N. Hart, Jean-Pierre A. Kocher, Patrick H. Duffy, 2014, Bioinform..

Calculating Sample Size Estimates for RNA Sequencing Data

Steven N. Hart, Yuji Zhang, Jean-Pierre A. Kocher, 2013, J. Comput. Biol..

PANDA: pathway and annotation explorer for visualizing and interpreting gene-centric data

Steven N. Hart, Michael T. Zimmermann, Jean-Pierre A. Kocher, 2015, PeerJ.

Performance benchmarking of GATK3.8 and GATK4

Saurabh Baheti, Matthew A Bockol, Travis M. Drucker, 2018 .

Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy

Mikel Hernaez, Saurabh Baheti, Travis M. Drucker, 2019, Front. Genet..

Classification of Melanocytic Lesions in Selected and Whole-Slide Images via Convolutional Neural Networks

Steven N. Hart, Thomas J. Flotte, Andrew P. Norgan, 2019, Journal of pathology informatics.

Comparative analysis of workflow management systems in production genomics research and the clinic

Katherine Kendig, Saurabh Baheti, Travis M. Drucker, 2020 .

Collaborative science in the next-generation sequencing era: a viewpoint on how to combine exome sequencing data across sites to identify novel disease susceptibility genes

Steven N. Hart, Robert J. Klein, Vignesh Ravichandran, 2016, Briefings Bioinform..

A Pathologist-Annotated Dataset for Validating Artificial Intelligence: A Project Description and Pilot Study

Australia, Steven N. Hart, Anant Madabhushi, 2020, Journal of pathology informatics.

The contribution of pathogenic variants in breast cancer susceptibility genes to familial breast cancer risk

Steven N. Hart, Chunling Hu, Mark E. Robson, 2017, npj Breast Cancer.

Abstract PD1-02: Cancer predisposition genes in metastatic breast cancer – Association with metastatic pattern, prognosis, patient and tumor characteristics

Steven N. Hart, Chunling Hu, Peter A. Fasching, 2018 .

From Days to Hours: Reporting Clinically Actionable Variants from Whole Genome Sequencing

Saurabh Baheti, Steven N. Hart, Jean-Pierre A. Kocher, 2014, PloS one.

Exome sequencing reveals frequent deleterious germline variants in cancer susceptibility genes in women with invasive breast cancer undergoing neoadjuvant chemotherapy

Ann M. Moyer, Steven N. Hart, Krishna R. Kalari, 2015, Breast Cancer Research and Treatment.

A Comparison of Whole Genome Gene Expression Profiles of HepaRG Cells and HepG2 Cells to Primary Human Hepatocytes and Human Liver Tissues

Steven N. Hart, S. Hart, Xiao-bo Zhong, 2010, Drug Metabolism and Disposition.