Eric W. Klee

发表

Computational performance and accuracy of Sentieon DNASeq variant calling workflow

Mikel Hernaez, Katherine Kendig, Saurabh Baheti, 2018, bioRxiv.

Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4

Ravishankar K. Iyer, Saurabh Baheti, Travis M. Drucker, 2019, BMC Bioinformatics.

The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation

Meenakshi Sharma, Eric W. Klee, Ashish Mittal, 2014, Database J. Biol. Databases Curation.

AMOD: a morpholino oligonucleotide selection tool

Eric W. Klee, Kyong Jin Shim, Lynda B. M. Ellis, 2005, Nucleic Acids Res..

SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing

Saurabh Baheti, Eric W. Klee, Xing Li, 2012, Bioinform..

An interlaboratory study of complex variant detection

Marc L. Salit, Eric W. Klee, Nazneen Rahman, 2017, bioRxiv.

Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.

Robert C. Green, Keith Marsolo, Casey Overby Taylor, 2019, American journal of human genetics.

Next Generation Clinical Diagnostics: The Sequence of Events

Eric W. Klee, Matthew J. Ferber, David I. Smith, 2014 .

PATH-26. NEURO-ONCOLOGY NEXT-GENERATION SEQUENCING 219-GENE PANEL FOR COMPREHENSIVE CLINICAL TESTING

Eric W. Klee, Caterina Giannini, Robert Brian Jenkins, 2018 .

Quantitating tissue specificity of human genes to facilitate biomarker discovery

Eric W. Klee, Terry M. Therneau, George Vasmatzis, 2007, Bioinform..

TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data

Ying Li, Saurabh Baheti, Eric W. Klee, 2011, Bioinform..

Performance benchmarking of GATK3.8 and GATK4

Saurabh Baheti, Matthew A Bockol, Travis M. Drucker, 2018, bioRxiv.

Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy

Mikel Hernaez, Saurabh Baheti, Travis M. Drucker, 2019, Front. Genet..

Comparative analysis of workflow management systems in production genomics research and the clinic

Katherine Kendig, Saurabh Baheti, Travis M. Drucker, 2020 .

Comparative analysis of de novo assemblers for variation discovery in personal genomes

Eric W. Klee, Michael Kalmbach, Shulan Tian, 2017, Briefings Bioinform..

Evaluating eukaryotic secreted protein prediction

Eric W. Klee, Lynda B. M. Ellis, E. Klee, 2005, BMC Bioinformatics.

HELLO: improved neural network architectures and methodologies for small variant calling

Eric W. Klee, Deming Chen, Steven S. Lumetta, 2021, BMC Bioinform..

Universally Rank Consistent Ordinal Regression in Neural Networks pdf

Eric W. Klee, W. Garrett Jenkinson, Kia Khezeli, 2021, ArXiv.

Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma

Eric W. Klee, Stephen D. Mastrian, Ahmet Kurdoglu, 2014, PLoS genetics.

Widening of the genetic and clinical spectrum of Lamb–Shaffer syndrome, a neurodevelopmental disorder due to SOX5 haploinsufficiency

Eric W. Klee, Ange-Line Bruel, Sophie Nambot, 2019, Genetics in Medicine.

Genome-Wide Reverse Genetics Framework to Identify Novel Functions of the Vertebrate Secretome

Eric W. Klee, Brent R. Bill, Stephen C. Ekker, 2006, PloS one.

Confirming Variants in Next-Generation Sequencing Panel Testing by Sanger Sequencing.

Eric W. Klee, Matthew J. Ferber, Devin Oglesbee, 2015, The Journal of molecular diagnostics : JMD.

Preserving personal autonomy in a genomic testing era

Eric W. Klee, Gianrico Farrugia, Matthew J. Ferber, 2013, Genetics in Medicine.

Clinical Applications and Utility of a Precision Medicine Approach for Patients With Unexplained Cytopenias.

William J. Hogan, Eric W. Klee, Tammy M. McAllister, 2019, Mayo Clinic proceedings.