Melanie Pham

发表

A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. “Hillquist”)

Erez Lieberman Aiden, M. Borodovsky, A. Lomsadze, 2022, bioRxiv.

Convergent selection on hormone signaling shaped social evolution in bees

Erez Lieberman Aiden, Beryl M. Jones, Fernando A. Villanea, 2022, bioRxiv.

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

Roy G van Heesbeen, Hans H. Cheng, F. Di Palma, 2021, Science.

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

Erez Lieberman Aiden, Ethalinda K. S. Cannon, J. Grimwood, 2019, Nature Genetics.

Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum

Neva C. Durand, Erez Lieberman Aiden, E. Aiden, 2018, bioRxiv.

The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000

Sanjit S. Batra, Neva C. Durand, Muhammad S. Shamim, 2018, bioRxiv.

Fine-mapping of nuclear compartments using ultra-deep Hi-C shows that active promoter and enhancer elements localize in the active A compartment even when adjacent sequences do not

William Stafford Noble, Erez Lieberman Aiden, M. Talkowski, 2021, bioRxiv.

Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement

Neva C. Durand, J. Bennetzen, H. Nguyen, 2021, Journal of advanced research.

Delineating the Tnt1 Insertion Landscape of the Model Legume Medicago truncatula cv. R108 at the Hi-C Resolution Using a Chromosome-Length Genome Assembly

K. Mysore, Erez Lieberman Aiden, Olga Dudchenko, 2021, International journal of molecular sciences.

Convergent and complementary selection shaped gains and losses of eusociality in sweat bees

Erez Lieberman Aiden, Beryl M. Jones, Fernando A. Villanea, 2023, Nature Ecology & Evolution.

Convergent selection on juvenile hormone signaling is associated with the evolution of eusociality in bees

Erez Lieberman Aiden, Beryl M. Jones, Fernando A. Villanea, 2021 .

Chromatin alternates between A and B compartments at kilobase scale for subgenic organization

William Stafford Noble, Erez Lieberman Aiden, A. Omer, 2023, Nature communications.