F. Buytaers

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine

K. Marchal, K. Vanneste, S. D. De Keersmaecker, 2020, Microorganisms.

Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study

K. Marchal, S. D. De Keersmaecker, N. Roosens, 2020, International journal of molecular sciences.

Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak

K. Marchal, K. Vanneste, S. D. De Keersmaecker, 2021, Microbial genomics.

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

K. Marchal, K. Vanneste, S. D. De Keersmaecker, 2021, Frontiers in Microbiology.

Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study

K. Marchal, K. Vanneste, S. D. De Keersmaecker, 2022, Foods.

A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products

K. Marchal, K. Vanneste, S. D. De Keersmaecker, 2021, Food chemistry. Molecular sciences.

The potential of including the microbiome as biomarker in population-based health studies: methods and benefits

S. D. De Keersmaecker, N. Roosens, F. Buytaers, 2024, Frontiers in public health.