M. Safak

发表

Expression of novel proteins by polyomaviruses and recent advances in the structural and functional features of agnoprotein of JC virus, BK virus, and simian virus 40

P. Coric, S. Bouaziz, A. S. Saribas, 2018, Journal of cellular physiology.

Regulation of Human Polyomavirus JC Virus Gene Transcription by AP-1 in Glial Cells

K. Khalili, B. Sadowska, M. Safak, 2003, Journal of Virology.

Dephosphorylation of JC virus agnoprotein by protein phosphatase 2A: inhibition by small t antigen.

K. Khalili, I. Sariyer, M. Safak, 2008, Virology.

The Brd4 acetyllysine-binding protein is involved in activation of polyomavirus JC

M. White, Dominique H. Cossari, Hassen S Wollebo, 2016, Journal of NeuroVirology.

Cdk9 phosphorylates p53 on serine 392 independently of CKII

A. Giordano, K. Khalili, P. Claudio, 2006, Journal of cellular physiology.

Human polyoma JC virus minor capsid proteins, VP2 and VP3, enhance large T antigen binding to the origin of viral DNA replication: evidence for their involvement in regulation of the viral DNA replication.

M. White, Jaslyn Johnson, A. S. Saribas, 2014, Virology.

Physical and Functional Interaction between the Y-Box Binding Protein YB-1 and Human Polyomavirus JC Virus Large T Antigen

G. Gallia, K. Khalili, M. Safak, 1999, Journal of Virology.

Tumor induction by simian and human polyomavirusesArticle

K. Khalili, I. Sariyer, I. Akan, 2004 .

Emerging From the Unknown: Structural and Functional Features of Agnoprotein of Polyomaviruses

P. Coric, J. Condra, M. White, 2016, Journal of cellular physiology.

Functional Interaction between JC Virus Late Regulatory Agnoprotein and Cellular Y-Box Binding Transcription Factor, YB-1

K. Khalili, B. Sadowska, M. Safak, 2002, Journal of Virology.

Y-Box Binding Transcription Factor , YB-1 Late Regulatory Agnoprotein and Cellular Functional Interaction between JC Virus

K. Khalili, B. Sadowska, M. Safak, 2002 .

Integrin α9β1 is a receptor for nerve growth factor and other neurotrophins

P. Lazarovici, G. Tuszynski, S. Lecht, 2008, Journal of Cell Science.

Interaction of the Single-stranded DNA-binding Protein Purα with the Human Polyomavirus JC Virus Early Protein T-antigen*

G. Gallia, K. Khalili, M. Safak, 1998, The Journal of Biological Chemistry.

Role for tumor necrosis factor-alpha in JC virus reactivation and progressive multifocal leukoencephalopathy

K. Khalili, M. White, L. D. Valle, 2011, Journal of Neuroimmunology.

Modulation of JC virus transcription by C/EBPbeta.

K. Khalili, L. Del Valle, M. White, 2009, Virus research.

JC virus-induced Progressive Multifocal Leukoencephalopathy.

Ahmet Y. Ozdemir, A. S. Saribas, M. Safak, 2010, Future virology.

Reciprocal Interaction between Two Cellular Proteins, Purα and YB-1, Modulates Transcriptional Activity of JCVCY in Glial Cells

G. Gallia, K. Khalili, M. Safak, 1999, Molecular and Cellular Biology.

Transcription of the JC virus archetype late genome: importance of the kappa B and the 23-base-pair motifs in late promoter activity in glial cells

K. Khalili, M. Razmara, P. Zoltick, 1996, Journal of virology.

Human polyomavirus JCV late leader peptide region contains important regulatory elements.

K. Khalili, S. Amini, M. White, 2006, Virology.

Phosphorylation Mutants of JC Virus Agnoprotein Are Unable To Sustain the Viral Infection Cycle

K. Khalili, J. Gordon, I. Sariyer, 2006, Journal of Virology.

Interaction of JC Virus Agno Protein with T Antigen Modulates Transcription and Replication of the Viral Genome in Glial Cells

K. Khalili, A. Darbinyan, Y. Okada, 2001, Journal of Virology.

Generation and characterization of JCV permissive hybrid cell lines.

K. Khalili, J. Gordon, I. Sariyer, 2009, Journal of virological methods.

Evidence for dysregulation of cell cycle by human polyomavirus, JCV, late auxiliary protein

A. Giordano, K. Khalili, N. Darbinian, 2002, Oncogene.

Neurotropic Viral Infections: JC virus molecular biology and the human demyelinating disease, progressive multifocal leukoencephalopathy

K. Khalili, M. White, L. D. Valle, 2008 .

Physical and functional interaction between viral and cellular proteins modulate JCV gene transcription

K. Khalili, M. Safak, 2001, Journal of NeuroVirology.

Infection by agnoprotein-negative mutants of polyomavirus JC and SV40 results in the release of virions that are mostly deficient in DNA content

M. White, I. Sariyer, A. S. Saribas, 2011, Virology Journal.

T-antigen of human polyomavirus JC cooperates withIGF-IR signaling system in cerebellar tumors of the childhood-medulloblastomas.

K. Khalili, L. Del Valle, K. Reiss, 2003, Anticancer research.

Small tumor antigen of polyomaviruses: Role in viral life cycle and cell transformation

K. Khalili, I. Sariyer, M. Safak, 2008, Journal of cellular physiology.

The agnoprotein of polyomaviruses: A multifunctional auxiliary protein

K. Khalili, M. White, K. Nagashima, 2005, Journal of cellular physiology.

Regulation of Gene Expression in Primate Polyomaviruses

K. Khalili, M. White, M. Safak, 2009, Journal of Virology.

Cooperative roles of NF-κB and NFAT4 in polyomavirus JC regulation at the KB control element.

K. Khalili, M. White, Hassen S Wollebo, 2012, Virology.

Human neurotropic polyomavirus, JC virus, agnoprotein targets mitochondrion and modulates its functions.

P. Jadiya, D. Tomar, R. Kamiński, 2020, Virology.

A comprehensive proteomics analysis of JC virus Agnoprotein-interacting proteins: Agnoprotein primarily targets the host proteins with coiled-coil motifs.

P. Datta, A. S. Saribas, M. Safak, 2019, Virology.

Structure‐based release analysis of the JC virus agnoprotein regions: A role for the hydrophilic surface of the major alpha helix domain in release

M. White, A. S. Saribas, M. Safak, 2018, Journal of cellular physiology.

Early growth response-1 protein is induced by JC virus infection and binds and regulates the JC virus promoter.

K. Khalili, L. Del Valle, M. White, 2008, Virology.

Members of the AP-1 Family, c-Jun and c-Fos, Functionally Interact with JC Virus Early Regulatory Protein Large T Antigen

K. Khalili, S. Amini, P. Ferrante, 2003, Journal of Virology.

Interaction of YB-1 with human immunodeficiency virus type 1 Tat and TAR RNA modulates viral promoter activity.

G. Gallia, K. Khalili, S. Amini, 1999, The Journal of general virology.

A 23-bp Sequence Element from Human Neurotropic JC Virus Is Responsive to NF-κB Subunits

G. Gallia, K. Khalili, M. Safak, 1999 .

Transcriptional regulation of human polyomavirus JC: evidence for a functional interaction between RelA (p65) and the Y-box-binding protein, YB-1

K. Khalili, G. Macdonald, M. Safak, 1996, Journal of virology.

Discovery and characterization of novel trans‐spliced products of human polyoma JC virus late transcripts from PML patients

M. White, Hassen S Wollebo, A. S. Saribas, 2018, Journal of cellular physiology.

Regulation of MCP-1 gene transcription by Smads and HIV-1 Tat in human glial cells.

K. Khalili, S. Amini, B. Sawaya, 2003, Virology.

Cell cycle regulation of NF-κB-binding activity in cells from human glioblastomas

K. Khalili, S. Amini, L. D. Valle, 2001 .

JC virus agnoprotein enhances large T antigen binding to the origin of viral DNA replication: evidence for its involvement in viral DNA replication.

M. White, A. S. Saribas, M. Safak, 2012, Virology.

Nuclear Magnetic Resonance Structure Revealed that the Human Polyomavirus JC Virus Agnoprotein Contains an α-Helix Encompassing the Leu/Ile/Phe-Rich Domain

P. Coric, M. White, S. Bouaziz, 2014, Journal of Virology.

Molecular Biology of JC Virus and the Human Demyelinating Disease, Progressive Multifocal Leukoencephalopathy

M. White, M. Safak, 2016 .

Essential roles of Leu/Ile/Phe-rich domain of JC virus agnoprotein in dimer/oligomer formation, protein stability and splicing of viral transcripts.

M. White, I. Sariyer, W. Childers, 2013, Virology.

Human polyomavirus JC small regulatory agnoprotein forms highly stable dimers and oligomers: implications for their roles in agnoprotein function.

M. White, R. Viola, A. S. Saribas, 2011, Virology.

An overview: Human polyomavirus JC virus and its associated disorders

K. Khalili, M. Safak, 2011, Journal of NeuroVirology.

Polyomaviruses of Humans

K. Khalili, M. Safak, 2008 .

Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein

P. Coric, J. Condra, M. White, 2017, Journal of cellular biochemistry.

Human polyomavirus, JC virus, and progressive multifocal leukoencephalopathy.

S. Lipton, I. Grant, H. Gendelman, 2005 .

Cell cycle regulation of NF-kappa b-binding activity in cells from human glioblastomas.

K. Khalili, S. Amini, L. Del Valle, 2001, Experimental cell research.

Human neurotropic polyomavirus, JC virus, late coding region encodes a novel nuclear protein, ORF4, which targets the promyelocytic leukemia nuclear bodies (PML-NBs) and modulates their reorganization

Hsin-Yao Tang, Hassen S Wollebo, A. S. Saribas, 2023, Virology.

Epigenetic regulation of polyomavirus JC involves acetylation of specific lysine residues in NF-κB p65

K. Khalili, M. White, Dominique H. Cossari, 2015, Journal of NeuroVirology.

Epigenetic regulation of polyomavirus JC

K. Khalili, M. White, Hassen S Wollebo, 2013, Virology Journal.

Essential roles of Leu/Ile/Phe-rich domain of JC virus agnoprotein in dimer/oligomer formation, protein stability and splicing of viral transcripts.

I. Sariyer, W. Childers, M. Abou-Gharbia, 2013, Virology.

A. S. Saribas, M. Safak, Sarah Mun, 2014, Virology.

Role for tumor necrosis factor-alpha in JC virus reactivation and progressive multifocal leukoencephalopathy

K. Khalili, M. White, L. D. Valle, 2011, Journal of Neuroimmunology.

Dephosphorylation of JC virus agnoprotein by protein phosphatase 2A: inhibition by small t antigen.

K. Khalili, I. Sariyer, M. Safak, 2008, Virology.

A 23-bp sequence element from human neurotropic JC virus is responsive to NF-kappa B subunits.

G. Gallia, K. Khalili, M. Safak, 1999, Virology.