Jeremy D. DeBarry

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Flash Demo: Secure, Collaborative, Management of Your Life Sciences Data with the Data Store

Jeremy D. DeBarry, 2015 .

How to do Big-Data Science – Data Management for Genomics

Jeremy D. DeBarry, 2016 .

Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm

Renyi Liu, Jeremy D. DeBarry, Jeffrey Bennetzen, 2008, BMC Bioinformatics.

Jumbled Genomes: Missing Apicomplexan Synteny

Jessica C. Kissinger, Jeremy D. DeBarry, J. Kissinger, 2011, Molecular biology and evolution.

Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study

Mark P. Styczynski, Jessica C. Kissinger, Karan Uppal, 2014, Front. Cell Dev. Biol..

Plasmodium knowlesi Cytoadhesion Involves SICA Variant Proteins

Jeremy D. DeBarry, Luís L. Fonseca, Jessica A. Brady, 2022, Frontiers in Cellular and Infection Microbiology.

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

Jeremy D. DeBarry, Haibao Tang, A. Paterson, 2012, Nucleic acids research.

De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)

Jeremy D. DeBarry, J. Bennetzen, J. Malek, 2011, Nature Biotechnology.

Distinct amino acid and lipid perturbations characterize acute versus chronic malaria.

Dean P. Jones, Jeremy D. DeBarry, M. Galinski, 2019, JCI insight.

VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center

Jeremy D. DeBarry, Gloria I. Giraldo-Calderón, Mikkel B. Christensen, 2021, Nucleic Acids Res..

Malaria disrupts the rhesus macaque gut microbiome

Jeremy D. DeBarry, M. Galinski, S. Pakala, 2023, Frontiers in Cellular and Infection Microbiology.

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

Jeremy D. DeBarry, Michael S. Barker, M. Gribskov, 2011, Science.

Sequence Analysis of Bacterial Artificial Chromosome Clones from the Apospory-Specific Genomic Region of Pennisetum and Cenchrus1[W][OA]

Jeremy D. DeBarry, Lixing Yang, J. Bennetzen, 2008, Plant Physiology.

Humoral immunity prevents clinical malaria during Plasmodium relapses without eliminating gametocytes

Mark P. Styczynski, Jeremy D. DeBarry, M. Galinski, 2019, PLoS pathogens.

Assembly of highly repetitive genomes using short reads: the genome of discrete typing unit III Trypanosoma cruzi strain 231

Jeremy D. DeBarry, J. Kissinger, J. DeBarry, 2018, Microbial genomics.

Genome cartography: charting the apicomplexan genome.

Jeremy D. DeBarry, J. Kissinger, J. DeBarry, 2011, Trends in parasitology.

Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques

Mark P. Styczynski, Jeremy D. DeBarry, M. Galinski, 2017, Malaria Journal.

PacBio assembly of a Plasmodium knowlesi genome sequence with Hi-C correction and manual annotation of the SICAvar gene family

Jeremy D. DeBarry, F. Ay, M. Galinski, 2017, Parasitology.

The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution

Jeremy D. DeBarry, J. Bennetzen, J. DeBarry, 2013, Heredity.

Applied Genomics: Data Mining Reveals Species-Specific Malaria Diagnostic Targets More Sensitive than 18S rRNA

Jeremy D. DeBarry, S. P. Kachur, J. Barnwell, 2011, Journal of Clinical Microbiology.

Theileria parasites secrete a prolyl isomerase to maintain host leukocyte transformation

Jeremy D. DeBarry, J. Weitzman, B. Villoutreix, 2014, Nature.

A Survey of Innovation through Duplication in the Reduced Genomes of Twelve Parasites

Jeremy D. DeBarry, J. Kissinger, J. DeBarry, 2014, PloS one.

The Genome of Haemoproteus tartakovskyi and Its Relationship to Human Malaria Parasites

Jeremy D. DeBarry, J. Kissinger, S. Bensch, 2016, Genome biology and evolution.

Real-Time Loop-Mediated Isothermal Amplification (RealAmp) for the Species-Specific Identification of Plasmodium vivax

Jeremy D. DeBarry, J. Barnwell, J. Kissinger, 2013, PloS one.

A New Single-Step PCR Assay for the Detection of the Zoonotic Malaria Parasite Plasmodium knowlesi

Ganesh Srinivasamoorthy, Jeremy D. DeBarry, Venkatachalam Udhayakumar, 2012, PloS one.

Clinical recovery of Macaca fascicularis infected with Plasmodium knowlesi

Jeremy D. DeBarry, Elizabeth D. Trippe, Luís L. Fonseca, 2021, Malaria Journal.

VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023

Jeremy D. DeBarry, Gloria I. Giraldo-Calderón, R. MacCallum, 2023, Nucleic acids research.