Andrea Bernini

发表

Transient pockets as mediators of gas molecules routes inside proteins: The case study of dioxygen pathway in homogentisate 1, 2-dioxygenase and its implication in Alkaptonuria development

Andrea Bernini, Silvia Galderisi, Ottavia Spiga, 2020, Comput. Biol. Chem..

Process calculi for biological processes

Pierpaolo Degano, Moreno Falaschi, Linda Brodo, 2018, Natural Computing.

ApreciseKUre: an approach of Precision Medicine in a Rare Disease

Andrea Bernini, Ottavia Spiga, Vittoria Cicaloni, 2017, BMC Medical Informatics and Decision Making.

Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: Application to the homogentisate 1, 2-dioxygenase mutants at the base of rare disease Alkaptonuria

Fabrizio Manetti, Andrea Bernini, Ottavia Spiga, 2017, Comput. Biol. Chem..

A new integrated and interactive tool applicable to inborn errors of metabolism: Application to alkaptonuria

Monica Bianchini, Andrea Zugarini, Alberto Rossi, 2018, Comput. Biol. Medicine.

Three-dimensional computation of atom depth in complex molecular structures

Andrea Bernini, Ottavia Spiga, Neri Niccolai, 2005, Bioinform..

ProCoCoA: A quantitative approach for analyzing protein core composition

Anna Tramontano, Diego Garlaschelli, Andrea Bernini, 2013, Comput. Biol. Chem..

AKUImg: A database of cartilage images of Alkaptonuria patients

Monica Bianchini, Andrea Bernini, Silvia Galderisi, 2020, Comput. Biol. Medicine.

Machine learning application for patient stratification and phenotype/genotype investigation in a rare disease

Giovanna Maria Dimitri, Andrea Bernini, Ottavia Spiga, 2021, Briefings Bioinform..

Towards an integrated interactive database for the search of stratification biomarkers in Alkaptonuria

Andrea Zugarini, Alberto Rossi, Andrea Bernini, 2016 .

A Computational Approach From Gene to Structure Analysis of the Human ABCA4 Transporter Involved in Genetic Retinal Diseases.

Andrea Bernini, Andrea Sodi, Ottavia Spiga, 2017, Investigative ophthalmology & visual science.

A branched peptide mimotope of the nicotinic receptor binding site is a potent synthetic antidote against the snake neurotoxin alpha-bungarotoxin.

Andrea Bernini, Neri Niccolai, Luisa Bracci, 2002, Biochemistry.

Probing protein surface accessibility with solvent and paramagnetic molecules

Andrea Bernini, Ottavia Spiga, Neri Niccolai, 2009 .

Peptide–protein interactions studied by surface plasmon and nuclear magnetic resonances

Andrea Bernini, Ottavia Spiga, Neri Niccolai, 2002, FEBS letters.

Homogentisic acid induces aggregation and fibrillation of amyloidogenic proteins.

Andrea Bernini, Pietro Lupetti, Ottavia Spiga, 2017, Biochimica et biophysica acta. General subjects.

NMR Studies on Structure and Dynamics of the Monomeric Derivative of BS-RNase: New Insights for 3D Domain Swapping

Andrea Bernini, Rolf Boelens, Neri Niccolai, 2012, PloS one.

Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human.

Guo-Ping Zhao, Zong-Ming Guo, Antoine Danchin, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Biochemical filtering of a protein-protein docking simulation identifies the structure of a complex between a recombinant antibody fragment and alpha-bungarotoxin.

Andrea Bernini, Neri Niccolai, Luisa Bracci, 2003, The Biochemical journal.