Achraf El Allali

发表

Assessing the effect of a series of mutations on the dynamic behavior of phosphite dehydrogenase using molecular docking, molecular dynamics and quantum mechanics/molecular mechanics simulations

Rachid Daoud, Soukayna Baammi, Achraf El Allali, 2022, Journal of biomolecular structure & dynamics.

Monte Carlo Method and GA-MLR-Based QSAR Modeling of NS5A Inhibitors against the Hepatitis C Virus

D. Villemin, D. Cherqaoui, Rachid Daoud, 2022, Molecules.

Hybrid Molecules as Potential Drugs for the Treatment of HIV: Design and Applications

D. Cherqaoui, Rachid Daoud, Ismail Hdoufane, 2022, Pharmaceuticals.

Genome-wide analysis identified candidate variants and genes associated with heat stress adaptation in Egyptian sheep breeds

A. Alsamman, A. Hamwieh, A. Aboul-Naga, 2022, Frontiers in Genetics.

PltRNAdb: Plant transfer RNA database

Morad M. Mokhtar, Achraf El Allali, 2022, PloS one.

A Network-Based Methodology to Identify Subnetwork Markers for Diagnosis and Prognosis of Colorectal Cancer

Olfat Al-Harazi, D. Çolak, Achraf El Allali, 2021, Frontiers in Genetics.

Biomolecular Databases and Subnetwork Identification Approaches of Interest to Big Data Community: An Expert Review.

Achraf El Allali, Dilek Colak, Olfat Al-Harazi, 2019, Omics : a journal of integrative biology.

PlantPathMarks (PPMdb): an interactive hub for pathways-based markers in plant genomes

Morad M. Mokhtar, M. Hegazy, M. Atia, 2021, Scientific Reports.

CicerSpTEdb: A web-based database for high-resolution genome-wide identification of transposable elements in Cicer species

Morad M. Mokhtar, A. Alsamman, Achraf El Allali, 2021, PloS one.

PlantLTRdb: An interactive database for 195 plant species LTR-retrotransposons

Morad M. Mokhtar, A. Alsamman, Achraf El Allali, 2023, Frontiers in Plant Science.

CNN-MGP: Convolutional Neural Networks for Metagenomics Gene Prediction

Amani A. Al-Ajlan, Achraf El Allali, 2018, Interdisciplinary Sciences: Computational Life Sciences.

In silico protein engineering shows that novel mutations affecting NAD+ binding sites may improve phosphite dehydrogenase stability and activity

Rachid Daoud, Soukayna Baammi, Achraf El Allali, 2023, Scientific Reports.

Unraveling the Dysbiosis of Vaginal Microbiome to Understand Cervical Cancer Disease Etiology—An Explainable AI Approach

H. Zayed, A. Alsamman, Achraf El Allali, 2023, Genes.

Integrated gene network analysis sheds light on understanding the progression of Osteosarcoma

H. Zayed, A. Alsamman, K. Vasudevan, 2023, Frontiers in Medicine.

Developing a new genic SSR primer database in faba bean (Vicia faba L.)

F. Maalouf, H. El-Garhy, M. M. Moustafa, 2021, Journal of Applied Genetics.

Evolving strategies and application of proteins and peptide therapeutics in cancer treatment.

H. Zayed, C. George Priya Doss, Kaviyarasi Renu, 2023, Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.

Afro-TB dataset as a large scale genomic data of Mycobacterium tuberuclosis in Africa

Rachid Daoud, M. Laamarti, Achraf El Allali, 2023, Scientific data.

Genome-wide association analysis of chickpea germplasms differing for salinity tolerance based on DArTseq markers

O. Momtaz, M. Mubarak, A. Alsamman, 2021, PloS one.

Identification, characterization, and validation of NBS-encoding genes in grass pea

Morad M. Mokhtar, Z. Kehel, A. Alsamman, 2023, Frontiers in Genetics.

Design of Potent Inhibitors Targeting the Main Protease of SARS-CoV-2 Using QSAR Modeling, Molecular Docking, and Molecular Dynamics Simulations

D. Cherqaoui, Ismail Hdoufane, C. Delaite, 2023, Pharmaceuticals.

Genome-wide identification, characterization, and validation of the bHLH transcription factors in grass pea

Morad M. Mokhtar, Z. Kehel, A. Alsamman, 2023, Frontiers in Genetics.

Machine learning in nutrient management: A review

Leonardus Vergütz, Achraf El Allali, Oumnia Ennaji, 2023, Artificial Intelligence in Agriculture.

A bibliometric analysis of the global impact of metaproteomics research

Rachid Daoud, Achraf El Allali, S. Aminu, 2023, Frontiers in microbiology.

Multi-combined QSAR, molecular docking, molecular dynamics simulation, and ADMET of Flavonoid derivatives as potent cholinesterase inhibitors

S. Belaaouad, M. Belghiti, M. Salah, 2023, Journal of biomolecular structure & dynamics.

Unleashing Nature’s potential: a computational approach to discovering novel VEGFR-2 inhibitors from African natural compound using virtual screening, ADMET analysis, molecular dynamics, and MMPBSA calculations

Rachid Daoud, Soukayna Baammi, Achraf El Allali, 2023, Frontiers in molecular biosciences.

CNN-MGP: Convolutional Neural Networks for Metagenomics Gene Prediction

Amani Al-Ajlan, Achraf El Allali, Amani A. Al-Ajlan, 2018, Interdisciplinary Sciences: Computational Life Sciences.

Single-cell transcriptomic analysis reveals crucial oncogenic signatures and its associative cell types involved in gastric cancer

H. Zayed, C. George Priya Doss, Achraf El Allali, 2023, Medical Oncology.

AlignStatPlot: An R package and online tool for robust sequence alignment statistics and innovative visualization of big data

Morad M. Mokhtar, Z. Kehel, A. Alsamman, 2023, PloS one.

In silico design of novel CDK2 inhibitors through QSAR, ADMET, molecular docking and molecular dynamics simulation studies

S. Belaaouad, M. Belghiti, M. Salah, 2023, Journal of biomolecular structure & dynamics.

MegaLTR: a web server and standalone pipeline for detecting and annotating LTR-retrotransposons in plant genomes

Morad M. Mokhtar, Achraf El Allali, 2023, Frontiers in plant science.

Expression analysis and mapping of Viral—Host Protein interactions of Poxviridae suggests a lead candidate molecule targeting Mpox

G. C, A. Alsamman, Achraf El Allali, 2024, BMC infectious diseases.

Airway and Oral microbiome profiling of SARS-CoV-2 infected asthma and non-asthma cases revealing alterations–A pulmonary microbial investigation

H. Zayed, A. Alsamman, Achraf El Allali, 2023, PloS one.

Transposable elements: multifunctional players in the plant genome

Morad M. Mokhtar, Achraf El Allali, Asmaa H Hassan, 2024, Frontiers in plant science.

QSAR, ADMET, molecular docking, and dynamics studies of 1,2,4-triazine-3(2H)-one derivatives as tubulin inhibitors for breast cancer therapy

Rachid Daoud, Soukayna Baammi, Achraf El Allali, 2024, Scientific reports.

Antibiotic discovery with artificial intelligence for the treatment of Acinetobacter baumannii infections

A. Hmadcha, Y. Smani, Soukayna Baammi, 2024, mSystems.