Daniel Varela

Evolving cellular automata schemes for protein folding modeling using the Rosetta atomic representation

J. Reyes, Daniel Varela, 2022, Genet. Program. Evolvable Mach..

A memetic algorithm enables efficient local and global all-atom protein-protein docking with backbone and sidechain flexibility

I. André, Daniel Varela, Vera Karlin, 2021, bioRxiv.

Protein structure prediction in an atomic model with differential evolution integrated with the crowding niching method

Daniel Varela, José Santos, José Santos, 2020, Natural Computing.

Crowding Differential Evolution for Protein Structure Prediction

José Santos, Daniel Varela, J. Reyes, 2019, IWINAC.

Niching methods integrated with a differential evolution memetic algorithm for protein structure prediction

J. Reyes, Daniel Varela, 2022, Swarm Evol. Comput..

Energy Minimization vs. Deep Learning Approaches for Protein Structure Prediction

J. Reyes, Daniel Varela, Juan Luis Filgueiras, 2022, IWINAC.

Protein structure prediction with energy minimization and deep learning approaches

José Santos, Daniel Varela, Juan Luis Filgueiras, 2023, Natural Computing.