David Danko

Progress Towards Standardizing Metagenomics: Applying Metagenomic Reference Material to Develop Reproducible Microbial Lysis Methods with Minimum Bias.

Ryan Sasada, Michael Weinstein, David Danko, 2020, Journal of biomolecular techniques : JBT.

Novel Algorithms for the Taxonomic Classification of Metagenomic Linked-Reads

Iman Hajirasouliha, David Danko, Dmitry Meleshko, 2019 .

Microbe Directory Data v1.0.0

Christopher E. Mason, Christopher E. Mason, Nicola Segata, 2017 .

Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance

Gunnar Rätsch, Emmanuel Dias-Neto, Niranjan Nagarajan, 2019, bioRxiv.

Comprehensive Benchmarking and Ensemble Approaches for Metagenomic Classifiers

Stefano Lonardi, Gail L. Rosen, Rita R. Colwell, 2017 .

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

Nicholas P. Tatonetti, Iman Hajirasouliha, Christopher E. Mason, 2020, bioRxiv.

Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

Stefano Lonardi, Gail L. Rosen, Rita R. Colwell, 2017, Genome Biology.

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

Jean Thierry-Mieg, Iman Hajirasouliha, Christopher E. Mason, 2020, bioRxiv.

Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment

Gunnar Rätsch, Emmanuel Dias-Neto, Niranjan Nagarajan, 2019, bioRxiv.