Nancy J. Cox

发表

The impact of rare variation on gene expression across tissues

Gao Wang, Mary Goldman, Brian Craft, 2016, Nature.

Systems Pharmacogenomics-Bridging the Gap

Russ B. Altman, Cheng Cheng, Marylyn D. Ritchie, 2012, Pacific Symposium on Biocomputing.

ExprTarget: An Integrative Approach to Predicting Human MicroRNA Targets

Yves A. Lussier, M. Eileen Dolan, Wei Zhang, 2010, PloS one.

STAMS: STRING-assisted module search for genome wide association studies and application to autism

Russ B. Altman, Nancy J. Cox, Eric R. Gamazon, 2016, Bioinform..

A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis

Wei Chen, Rui Chen, Qiang Wei, 2015, Bioinform..

Global circulation patterns of seasonal influenza viruses vary with antigenic drift

Trevor Bedford, Colin A. Russell, Derek J. Smith, 2015, Nature.

SCAN database: facilitating integrative analyses of cytosine modification and expression QTL

Wei Zhang, Cong Liu, Xu Zhang, 2015, Database J. Biol. Databases Curation.

Consensus Genotyper for Exome Sequencing (CGES): improving the quality of exome variant genotypes

Alex Rodriguez, Ian T. Foster, Ravi K. Madduri, 2015, Bioinform..

APT-DLD: An algorithm for identifying DLD in EHRs (Walters et al., 2020)

Jennifer E. Below, Nancy J. Cox, Stephen Camarata, 2020 .

Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases

Yves A. Lussier, Jianrong Li, Haiquan Li, 2013, J. Am. Medical Informatics Assoc..

MetaXcan: Summary Statistics Based Gene-Level Association Method Infers Accurate PrediXcan Results

Hae Kyung Im, Nancy J. Cox, Dan L. Nicolae, 2016 .

Consistency in large pharmacogenomic studies

Nancy J. Cox, Eric R. Gamazon, Cathal Seoighe, 2016, Nature.

GEL: a novel genotype calling algorithm using empirical likelihood

Xiaolin Wu, Nancy J. Cox, Dan L. Nicolae, 2006, Bioinform..

SCAN: SNP and copy number annotation

Wei Zhang, M. Eileen Dolan, Nancy J. Cox, 2010, Bioinform..

Meta-Analysis of 23 Type 2 Diabetes Linkage Studies from the International Type 2 Diabetes Linkage Analysis Consortium

Weihua Guan, Nancy J. Cox, Michael Boehnke, 2007, Human Heredity.

LPA Variants Are Associated With Residual Cardiovascular Risk in Patients Receiving Statins

George Hripcsak, Joshua C. Denny, Peggy L. Peissig, 2018, Circulation.

Genetic studies of variation in rayleigh and photometric matches in normal trichromats

Joel Pokorny, Vivianne C. Smith, Margaret Lutze, 1990, Vision Research.

A Study of CNVs As Trait-Associated Polymorphisms and As Expression Quantitative Trait Loci

Nancy J. Cox, Eric R. Gamazon, Dan L. Nicolae, 2011, PLoS genetics.

Establishment of CYP2D6 Reference Samples by Multiple Validated Genotyping Platforms

Yusuke Nakamura, Hae Kyung Im, Nancy J. Cox, 2014, The Pharmacogenomics Journal.

Maternal transmission of a rare GABRB3 signal peptide variant is associated with autism

Nancy J. Cox, Eric Courchesne, Edwin H. Cook, 2009, Molecular Psychiatry.

Variants Affecting Exon Skipping Contribute to Complex Traits

Yves A. Lussier, M. Eileen Dolan, Nancy J. Cox, 2012, PLoS genetics.

Chemotherapeutic drug susceptibility associated SNPs are enriched in expression quantitative trait loci

M. Eileen Dolan, Nancy J. Cox, Eric R. Gamazon, 2010, Proceedings of the National Academy of Sciences.

Cancer pharmacogenomics: strategies and challenges

M. Eileen Dolan, Nancy J. Cox, Mark J. Ratain, 2012, Nature Reviews Genetics.

A Genome-wide Association Study of Early-Onset Breast Cancer Identifies PFKM as a Novel Breast Cancer Gene and Supports a Common Genetic Spectrum for Breast Cancer at Any Age

Jianxin Shi, Daniel F. Schmidt, Nazneen Rahman, 2014, Cancer Epidemiology, Biomarkers & Prevention.

Biomolecular Systems of Disease Buried Across Multiple GWAS Unveiled by Information Theory and Ontology

Yves A. Lussier, Jianrong Li, Nancy J. Cox, 2010, Summit on translational bioinformatics.

A brief history of human disease genetics

Mark I. McCarthy, Heidi L. Rehm, Jay Shendure, 2020, Nature.

An exponential combination procedure for set-based association tests in sequencing studies.

Li Hsu, Nancy J. Cox, Eric R. Gamazon, 2012, American journal of human genetics.

Distant regulatory effects of genetic variation in multiple human tissues

Eleazar Eskin, Manolis Kellis, Buhm Han, 2016, bioRxiv.

A genome-wide search for asthma susceptibility loci in ethnically diverse populations

Farhad Imani, Alan R. Leff, James L. Weber, 1997, Nature Genetics.

Rare Copy Number Variants in NRXN1 and CNTN6 Increase Risk for Tourette Syndrome

Douglas W. Woods, Jae Hoon Sul, Michael S. Okun, 2016, Neuron.

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Mary Goldman, Brian Craft, Jingchun Zhu, 2016, Nature Communications.

A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity

M. Eileen Dolan, Wei Zhang, Nancy J. Cox, 2007, Proceedings of the National Academy of Sciences.

A genome-wide association study of breast cancer in women of African ancestry

Clement Adebamowo, Olufunmilayo I. Olopade, Gary K. Chen, 2012, Human Genetics.

Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus

Tom H. Lindner, Eric Boerwinkle, Naoko Iwasaki, 2000, Nature Genetics.

Comprehensive Survey of SNPs in the Affymetrix Exon Array Using the 1000 Genomes Dataset

M. Eileen Dolan, Wei Zhang, Nancy J. Cox, 2010, PloS one.

Abstract 15518: Novel SNPs Associated with Warfarin Dose in a Large Multicenter Cohort of African Americans: Genome Wide Association Study and Replication Results

Russ B. Altman, Teri E. Klein, Dana C. Crawford, 2011 .

Identification, Replication, and Functional Fine-Mapping of Expression Quantitative Trait Loci in Primary Human Liver Tissue

Christopher D. Brown, Gregory M. Cooper, Deborah A. Nickerson, 2011, PLoS genetics.

Platinum Sensitivity–Related Germline Polymorphism Discovered via a Cell-Based Approach and Analysis of Its Association with Outcome in Ovarian Cancer Patients

Brooke L. Fridley, M. Eileen Dolan, Soma Das, 2011, Clinical Cancer Research.

Transancestral fine-mapping of four type 2 diabetes susceptibility loci highlights potential causal regulatory mechanisms

Sungkyoung Choi, Taesung Park, Gonçalo Abecasis, 2016, Human molecular genetics.

Integrating tissue specific mechanisms into GWAS summary results

Hae Kyung Im, Nancy J. Cox, Dan L. Nicolae, 2017 .

Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

Andrew B. Nobel, Fred A. Wright, Ivan Rusyn, 2015, Scientific Reports.

Mixed Effects Modeling of Proliferation Rates in Cell-Based Models: Consequence for Pharmacogenomics and Cancer

M. Eileen Dolan, Hae Kyung Im, Nancy J. Cox, 2012, PLoS genetics.

Identification and Functional Characterization of G6PC2 Coding Variants Influencing Glycemic Traits Define an Effector Transcript at the G6PC2-ABCB11 Locus

Nicola L. Beer, Pablo Cingolani, Mark I. McCarthy, 2015, PLoS genetics.

Identification of common genetic variants that account for transcript isoform variation between human populations

Lijun He, M. Eileen Dolan, Wei Zhang, 2008, Human Genetics.

Bedside Back to Bench: Building Bridges between Basic and Clinical Genomic Research

Monte Westerfield, Wendy S. Rubinstein, Gregory M. Cooper, 2017, Cell.

Partitioning the Heritability of Tourette Syndrome and Obsessive Compulsive Disorder Reveals Differences in Genetic Architecture

Benjamin D. Greenberg, Ying Wang, Naomi R. Wray, 2013, PLoS genetics.

Loci on chromosomes 2 (NIDDM1) and 15 interact to increase susceptibility to diabetes in Mexican Americans

Nancy J. Cox, Dan L. Nicolae, Graeme I. Bell, 1999, Nature Genetics.

Local genetic effects on gene expression across 44 human tissues

Eleazar Eskin, Andrew B. Nobel, Fred A. Wright, 2016, bioRxiv.