A. Al-Shahib

A. Underwood, J. Coelho, R. Tewolde, 2019, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Integration of Genomic and Other Epidemiologic Data to Investigate and Control a Cross-Institutional Outbreak of Streptococcus pyogenes

K. Jolley, N. McCarthy, M. Doumith, 2016, Emerging infectious diseases.

Whole genome sequencing of Streptococcus pneumoniae: development, evaluation and verification of targets for serogroup and serotype prediction using an automated pipeline

D. Litt, A. Underwood, C. Sheppard, 2016, PeerJ.

Emergence of a novel lineage containing a prophage in emm/M3 group A Streptococcus associated with upsurge in invasive disease in the UK

A. Efstratiou, A. Underwood, S. Sriskandan, 2016, Microbial genomics.

High-Resolution Analysis by Whole-Genome Sequencing of an International Lineage (Sequence Type 111) of Pseudomonas aeruginosa Associated with Metallo-Carbapenemases in the United Kingdom

A. Witney, N. Woodford, J. Turton, 2015, Journal of Clinical Microbiology.

Feature Selection and the Class Imbalance Problem in Predicting Protein Function from Sequence

Ali Al-Shahib, Rainer Breitling, David Gilbert, 2005, Applied bioinformatics.

Tracing the transition of methicillin resistance in sub-populations of Staphylococcus aureus, using SELDI-TOF Mass Spectrometry and Artificial Neural Network Analysis.

Ali Al-Shahib, Graham Ball, Raju Misra, 2011, Systematic and applied microbiology.

Genome analysis following a national increase in Scarlet Fever in England 2014

R. Guy, Alan P. Johnson, A. Underwood, 2017, BMC Genomics.

snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing

Ali Al-Shahib, Anthony Underwood, A. Underwood, 2013, BMC Bioinformatics.