A. T. Kodamullil

Elucidating gene expression patterns across multiple biological contexts through a large-scale investigation of transcriptomic datasets

M. Hofmann-Apitius, Rebeca Queiroz Figueiredo, S. D. del Ser, 2022, BMC Bioinformatics.

STonKGs: a sophisticated transformer trained on biomedical text and knowledge graphs

Benjamin M. Gyori, Charles Tapley Hoyt, John A. Bachman, 2021, bioRxiv.

The COVID-19 Ontology

M. Hofmann-Apitius, S. Gebel, Manfred Kohler, 2020, Bioinform..

Data-Driven Modeling of Knowledge Assemblies in Understanding Comorbidity Between Type 2 Diabetes Mellitus and Alzheimer’s Disease

M. Hofmann-Apitius, Daniel Domingo-Fernándéz, S. Madan, 2020, Journal of Alzheimer's disease : JAD.

A method for the rational selection of drug repurposing candidates from multimodal knowledge harmonization

M. Peitsch, R. Eils, H. Fröhlich, 2021, Scientific Reports.