Azad Ahmed

发表

Characterization, Distribution, and Expression of Novel Genes among Eight Clinical Isolates of Streptococcuspneumoniae

G. Ehrlich, D. Greenberg, F. Hu, 2006, Infection and Immunity.

The bacterial microbiota of Hunner lesion interstitial cystitis/bladder pain syndrome

Archana S Bhat, J. Mell, J. Earl, 2021, BJU international.

The distributed genome hypothesis as a rubric for understanding evolution in situ during chronic bacterial biofilm infectious processes.

J. Earl, G. Ehrlich, N. Hiller, 2010, FEMS immunology and medical microbiology.

Construction and characterization of a highly redundant Pseudomonas aeruginosa genomic library prepared from 12 clinical isolates: application to studies of gene distribution among populations.

G. Ehrlich, F. Hu, S. Sayeed, 2006, International journal of pediatric otorhinolaryngology.

Gene expression differences in infected and noninfected middle ear complementary DNA libraries.

G. Ehrlich, F. Hu, J. Post, 2009, Archives of otolaryngology--head & neck surgery.

Development and Validation of an Haemophilus influenzae Supragenome Hybridization (SGH) Array for Transcriptomic Analyses

J. Earl, G. Ehrlich, N. Hiller, 2014, PloS one.

Genome of alkaliphilic Bacillus pseudofirmus OF 4 reveals adaptations

D. M. Ivey, Karl A. Hassan, Masahiro Ito, 2011 .

Evidence for the Existence of a Bacterial Etiology for Alzheimer’s Disease and for a Temporal-Spatial Development of a Pathogenic Microbiome in the Brain

J. Earl, G. Ehrlich, Yves Moné, 2022, bioRxiv.

Nontypeable Haemophilus influenzae Genetic Islands Associated with Chronic Pulmonary Infection

J. Gilsdorf, J. Earl, G. Ehrlich, 2012, PloS one.

Species-Level Profiling of Ixodes pacificus Bacterial Microbiomes Reveals High Variability Across Short Spatial Scales at Different Taxonomic Resolutions.

Archana S Bhat, J. Mell, J. Earl, 2021, Genetic testing and molecular biomarkers.

Complete Genome Sequence of Aggregatibacter actinomycetemcomitans Strain CU1000N

C. Cugini, N. Ramasubbu, Azad Ahmed, 2022, Microbiology resource announcements.

Comparing culture and molecular methods for the identification of microorganisms involved in necrotizing soft tissue infections

S. Poulsen, P. Nielsen, J. Earl, 2016, BMC Infectious Diseases.

Comparative supragenomic analyses among the pathogens Staphylococcus aureus, Streptococcus pneumoniae, and Haemophilus influenzae Using a modification of the finite supragenome model

Garth D Ehrlich, Evan Powell, Paul Stoodley, 2011, BMC Genomics.

Fine mapping a gene for pediatric gastroesophageal reflux on human chromosome 13q14

J. Donfack, G. Ehrlich, F. Hu, 2004, Human Genetics.

Comparative analysis and supragenome modeling of twelve Moraxella catarrhalis clinical isolates

J. Earl, G. Ehrlich, A. Campagnari, 2011, BMC Genomics.

The Tsk2/+ mouse fibrotic phenotype is due to a gain-of-function mutation in the PIIINP segment of the Col3a1 gene

M. Whitfield, J. Earl, G. Ehrlich, 2014, The Journal of investigative dermatology.

SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021

Brendan J. Kelly, F. Bushman, J. Mell, 2022, mBio.

SARS-CoV-2 variants associated with vaccine breakthrough in the Delaware Valley through summer 2021

Brendan J. Kelly, F. Bushman, J. Mell, 2021, medRxiv.

Comparative Genomic Analyses of 17 Clinical Isolates of Gardnerella vaginalis Provide Evidence of Multiple Genetically Isolated Clades Consistent with Subspeciation into Genovars

B. Hall, Adam C. Retchless, J. Earl, 2012, Journal of bacteriology.

Whole genome sequencing of Streptomyces actuosus ISP-5337, Streptomyces sioyaensis B-5408, and Actinospica acidiphila B-2296 reveals secondary metabolomes with antibiotic potential

J. Earl, G. Ehrlich, R. Ehrlich, 2021, Biotechnology reports.

Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 Isolates

F. Bushman, S. Coffin, M. Feldman, 2021, Open forum infectious diseases.

Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 isolates from Pennsylvania

F. Bushman, J. Mell, J. Everett, 2021, bioRxiv.

Comparative Genomic Analyses of the Moraxella catarrhalis Serosensitive and Seroresistant Lineages Demonstrate Their Independent Evolution

Zhemin Zhou, J. Earl, G. Ehrlich, 2016, Genome biology and evolution.

Design and validation of a supragenome array for determination of the genomic content of Haemophilus influenzae isolates

J. Gilsdorf, J. Earl, G. Ehrlich, 2013, BMC Genomics.

Differences in Genotype and Virulence among Four Multidrug-Resistant Streptococcus pneumoniae Isolates Belonging to the PMEN1 Clone

H. Tettelin, A. Tomasz, S. Daugherty, 2011, PloS one.

Mapping a gene for dupuytren contracture in two Swedish families.

G. Ehrlich, F. Hu, J. Post, 2002 .

Deletion of genes involved in the ketogluconate metabolism, Entner-Doudoroff pathway, and glucose dehydrogenase increase local and invasive virulence phenotypes in Streptococcus pneumoniae

G. Ehrlich, C. Tsai, F. Hu, 2019, PloS one.

Virulence Potential and Genome-Wide Characterization of Drug Resistant Streptococcus pneumoniae Clones Selected In Vivo by the 7-Valent Pneumococcal Conjugate Vaccine

A. Tomasz, J. Earl, G. Ehrlich, 2013, PloS one.

Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743.

Hye Kyong Kweon, Robert M. Williams, D. Sherman, 2011, ACS chemical biology.

Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.

D. M. Ivey, Karl A. Hassan, A. Kolstø, 2011, Environmental microbiology.

Identification, Distribution, and Expression of Novel Genes in 10 Clinical Isolates of Nontypeable Haemophilus influenzae

G. Ehrlich, F. Hu, S. Sayeed, 2005, Infection and Immunity.

Extensive Genomic Plasticity in Pseudomonas aeruginosa Revealed by Identification and Distribution Studies of Novel Genes among Clinical Isolates

G. Ehrlich, F. Hu, S. Sayeed, 2006, Infection and Immunity.

In Vivo Capsular Switch in Streptococcus pneumoniae – Analysis by Whole Genome Sequencing

A. Tomasz, G. Ehrlich, N. Hiller, 2012, PloS one.

Generation of Genic Diversity among Streptococcus pneumoniae Strains via Horizontal Gene Transfer during a Chronic Polyclonal Pediatric Infection

Justin S. Hogg, R. Sampath, J. Earl, 2010, PLoS pathogens.

The Tsk2/+ mouse fibrotic phenotype is due to a gain-of-function mutation in the PIIINP segment of the Col3a1 gene

M. Whitfield, J. Earl, G. Ehrlich, 2014, The Journal of investigative dermatology.

Evidence supportive of a bacterial component in the etiology for Alzheimer’s disease and for a temporal-spatial development of a pathogenic microbiome in the brain

J. Earl, Bhaswati Sen, G. Ehrlich, 2023, Frontiers in cellular and infection microbiology.