C. Onyango

发表

Ebola Laboratory Response at the Eternal Love Winning Africa Campus, Monrovia, Liberia, 2014-2015.

Robert J. Fischer, T. Nyenswah, J. Strong, 2016, The Journal of infectious diseases.

Plasmodium Parasitemia Associated With Increased Survival in Ebola Virus-Infected Patients.

Robert J. Fischer, T. Nyenswah, J. Strong, 2016, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Rotavirus group A genotype circulation patterns across Kenya before and after nationwide vaccine introduction, 2010–2018

J. Tate, U. Parashar, C. Agoti, 2020, BMC Infectious Diseases.

Impact of the Introduction of Rotavirus Vaccine on Hospital Admissions for Diarrhea Among Children in Kenya: A Controlled Interrupted Time-Series Analysis

J. Tate, U. Parashar, D. Nokes, 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Impact of viral upper respiratory tract infection on the concentration of nasopharyngeal pneumococcal carriage among Kenyan children

D. Murdoch, L. Hammitt, J. Scott, 2018, Scientific Reports.

Epidemiological Investigation of a Rift Valley Fever Outbreak in Humans and Livestock in Kenya, 2018

Z. Gura, B. Bett, M. Muturi, 2020, The American journal of tropical medicine and hygiene.

Tickborne Arbovirus Surveillance in Market Livestock, Nairobi, Kenya

R. Tesh, M. Crabtree, R. Sang, 2006, Emerging infectious diseases.

Indirect Effects of 10-Valent Pneumococcal Conjugate Vaccine Against Adult Pneumococcal Pneumonia in Rural Western Kenya.

C. Whitney, M. Widdowson, D. Feikin, 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Intrahost evolution of the HIV-2 capsid correlates with progression to AIDS

F. Månsson, T. D. de Silva, P. Medstrand, 2021, Virus evolution.

Identification and characterization of influenza A viruses in selected domestic animals in Kenya, 2010-2012

C. Cardona, Lilian W. Waiboci, M. K. Njenga, 2018, PloS one.

Molecular Epidemiology of Human Rhinovirus Infections in Kilifi, Coastal Kenya

R. Myers, P. Cane, C. Agoti, 2012, Journal of medical virology.

Building laboratory capacity to detect and characterize pathogens of public and global health security concern in Kenya

M. Widdowson, R. Breiman, J. Montgomery, 2019, BMC Public Health.

The Merits of Malaria Diagnostics during an Ebola Virus Disease Outbreak

Robert J. Fischer, T. Nyenswah, J. Strong, 2016, Emerging infectious diseases.

Impact of 10-Valent Pneumococcal Conjugate Vaccine Introduction on Pneumococcal Carriage and Antibiotic Susceptibility Patterns Among Children Aged <5 Years and Adults With Human Immunodeficiency Virus Infection: Kenya, 2009–2013

C. Whitney, F. Lessa, R. Breiman, 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Postmortem Study of Cause of Death Among Children Hospitalized With Respiratory Illness in Kenya

D. Roberts, M. Widdowson, S. Zaki, 2021, The Pediatric infectious disease journal.

Determining the Cause of Death Among Children Hospitalized With Respiratory Illness in Kenya: Protocol for Pediatric Respiratory Etiology Surveillance Study (PRESS)

D. Roberts, M. Widdowson, S. Zaki, 2019, JMIR research protocols.

Defining the vaccination window for respiratory syncytial virus (RSV) using age-seroprevalence data for children in Kilifi, Kenya

D. Nokes, P. Munywoki, J. Nyiro, 2017, PloS one.

Menstrual cups and cash transfer to reduce sexual and reproductive harm and school dropout in adolescent schoolgirls: study protocol of a cluster-randomised controlled trial in western Kenya

Duolao Wang, P. Phillips-Howard, Jane K. A. Juma, 2019, BMC Public Health.

The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric Shigella Vaccine Trials

R. Haque, M. Levine, N. Iqbal, 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Cholera Outbreak in Dadaab Refugee Camp, Kenya — November 2015–June 2016

R. Joseph, M. Ope, John Kiogora, 2018, MMWR. Morbidity and mortality weekly report.

Evaluation of a TaqMan Array Card for Detection of Central Nervous System Infections

M. Oneko, P. Rota, J. Montgomery, 2017, Journal of Clinical Microbiology.

Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques

Maureen H Diaz, S. Zaki, Peter Muturi, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Histopathology Is Key to Interpreting Multiplex Molecular Test Results From Postmortem Minimally Invasive Tissue Samples

Maureen H Diaz, S. Zaki, J. Winchell, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Comparison of respiratory pathogen yields from Nasopharyngeal/Oropharyngeal swabs and sputum specimens collected from hospitalized adults in rural Western Kenya

J. Winchell, B. Fields, J. Mott, 2019, Scientific Reports.

A Combined Syndromic Approach to Examine Viral, Bacterial, and Parasitic Agents among Febrile Patients: A Pilot Study in Kilombero, Tanzania

J. Montgomery, Jieng-Lung Liu, E. Houpt, 2017, The American journal of tropical medicine and hygiene.

The contribution of respiratory pathogens to fatal and non-fatal respiratory hospitalizations: a pilot study of Taqman Array Cards (TAC) in Kenya

B. Fields, B. Juma, J. Mott, 2017, BMC Infectious Diseases.

A diagnostic and epidemiologic investigation of acute febrile illness (AFI) in Kilombero, Tanzania

J. Montgomery, C. Hercik, B. Fields, 2017, PloS one.

Diagnostic accuracy of the Panbio COVID-19 antigen rapid test device for SARS-CoV-2 detection in Kenya, 2021: A field evaluation

P. Munywoki, M. Bulterys, R. Aman, 2022, medRxiv.

The Impact of Maternal Human Immunodeficiency Virus Infection on the Burden of Respiratory Syncytial Virus Among Pregnant Women and Their Infants, Western Kenya

G. Langley, S. Chaves, G. Emukule, 2020, The Journal of infectious diseases.

Respiratory syncytial virus seasonality in three epidemiological zones of Kenya

D. Nokes, P. Munywoki, S. Gerber, 2020, Influenza and other respiratory viruses.

Comparison of Minimally Invasive Tissue Sampling With Conventional Autopsy to Detect Pulmonary Pathology Among Respiratory Deaths in a Resource-Limited Setting.

D. Roberts, M. Widdowson, S. Zaki, 2019, American journal of clinical pathology.

1445. Impact of 10-Valent Pneumococcal Conjugate Vaccine Introduction on Pneumococcal Carriage and Antibiotic Susceptibility Patterns Among Children Aged <5 Years and Adults with HIV Infection, Kenya 2009–2013

C. Whitney, F. Lessa, R. Breiman, 2018, Open Forum Infectious Diseases.

Incorporating COVID-19 into Acute Febrile Illness Surveillance Systems, Belize, Kenya, Ethiopia, Peru, and Liberia, 2020–2021

D. Sugerman, K. Murray, L. Peruski, 2022, Emerging infectious diseases.

Deaths Attributed to Respiratory Syncytial Virus in Young Children in High–Mortality Rate Settings: Report from Child Health and Mortality Prevention Surveillance (CHAMPS)

S. Madhi, Q. Bassat, C. Whitney, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Prevalence of colonization with multidrug-resistant bacteria in communities and hospitals in Kenya

Aditya Sharma, D. Call, S. Kariuki, 2022, Scientific reports.

Adapting Longstanding Public Health Collaborations between Government of Kenya and CDC Kenya in Response to the COVID-19 Pandemic, 2020–2021

A. Mohamed, K. D. de Cock, D. Kimanga, 2022, Emerging infectious diseases.

First cases of SARS-CoV-2 infection and secondary transmission in Kisumu, Kenya

C. Cohen, P. Munyua, E. Hunsperger, 2022, PLOS global public health.

Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study

Fatima Aziz, Inacio Mandomando, Anowar Hossain, 2016, The Lancet.

Successes and challenges of the One Health approach in Kenya over the last decade

R. Breiman, J. Montgomery, S. Lowther, 2019, BMC Public Health.

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form

S. Rowland-Jones, H. Whittle, B. Foley, 2010, Retrovirology.

HIV-2 capsids distinguish high and low virus load patients in a West African community cohort.

S. Rowland-Jones, H. Whittle, M. Cotten, 2009, Vaccine.

Microbiome sharing between children, livestock and household surfaces in western Kenya

E. Borenstein, O. Manor, D. Call, 2017, PloS one.

Examining the safety of menstrual cups among rural primary school girls in western Kenya: observational studies nested in a randomised controlled feasibility study

P. Phillips-Howard, K. Laserson, Jane K. A. Juma, 2017, BMJ Open.

Drought-associated chikungunya emergence along coastal East Africa.

C. Tucker, R. Sang, J. Small, 2007, The American journal of tropical medicine and hygiene.

High incidence of human brucellosis in a rural Pastoralist community in Kenya, 2015.

M. Widdowson, Clayton O Onyango, I. Ngere, 2021, PLoS neglected tropical diseases.

Seroprevalence of Chikungunya virus infection on Grande Comore Island, union of the Comoros, 2005.

R. Sang, A. Yahaya, A. Powers, 2007, The American journal of tropical medicine and hygiene.

HLA-associated polymorphisms in the HIV-2 capsid highlight key differences between HIV-1 and HIV-2 immune adaptation

S. Rowland-Jones, J. Carlson, M. Cotten, 2018, AIDS.

Robust Gag-specific T cell responses characterize viremia control in HIV-2 infection.

S. Rowland-Jones, H. Whittle, A. McMichael, 2007, The Journal of clinical investigation.

Development of a TaqMan Array Card for Acute-Febrile-Illness Outbreak Investigation and Surveillance of Emerging Pathogens, Including Ebola Virus

J. Crump, J. Montgomery, Jieng-Lung Liu, 2015, Journal of Clinical Microbiology.

Yellow Fever Outbreak, Imatong, Southern Sudan

R. Sang, N. Waters, P. Tukei, 2004, Emerging infectious diseases.

An Intensive, Active Surveillance Reveals Continuous Invasion and High Diversity of Rhinovirus in Households

P. Cane, G. Medley, C. Agoti, 2018, The Journal of infectious diseases.

Anti-inflammatory SARS-CoV-2 T cell immunity in asymptomatic seronegative Kenyan adults

C. Dutertre, A. Bertoletti, O. Anzala, 2023, medRxiv.

The genomic epidemiology of SARS-CoV-2 variants of concern in Kenya

A. Rambaut, M. Cotten, C. Agoti, 2022, medRxiv.

The presence of prolines in the flanking region of an immunodominant HIV‐2 gag epitope influences the quality and quantity of the epitope generated

S. Rowland-Jones, H. Whittle, A. McMichael, 2015, European journal of immunology.

Highly avid, oligoclonal, early‐differentiated antigen‐specific CD8+ T cells in chronic HIV‐2 infection

S. Rowland-Jones, H. Whittle, A. McMichael, 2010, European journal of immunology.

Population dynamics of HIV-2 in rural West Africa: comparison with HIV-1 and ongoing transmission at the heart of the epidemic

S. Rowland-Jones, H. Whittle, M. Cotten, 2013, AIDS.

P. Cane, G. Medley, C. Agoti, 2012, The Journal of infectious diseases.

Laboratory diagnosis of Ebola hemorrhagic fever during an outbreak in Yambio, Sudan, 2004.

P. Formenty, R. Sang, W. Bellini, 2007, The Journal of infectious diseases.

Molecular epidemiology of endemic human T-lymphotropic virus type 1 in a rural community in Guinea-Bissau.

H. Whittle, M. Cotten, P. Aaby, 2012, PLoS neglected tropical diseases.

Seroepidemiological Survey of Rift Valley Fever Virus in Ruminants in Garissa, Kenya.

B. Bett, S. Thumbi, S. Kiama, 2017, Vector borne and zoonotic diseases.

Effectiveness of Monovalent Rotavirus Vaccine Against Hospitalization With Acute Rotavirus Gastroenteritis in Kenyan Children

J. Tate, U. Parashar, D. Nokes, 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Yellow Fever Outbreak, Southern Sudan, 2003

R. Sang, A. Sow, R. Swanepoel, 2004, Emerging infectious diseases.

Seroprevalence of Chikungunya virus (CHIKV) infection on Lamu Island, Kenya, October 2004.

Rosalia M. Kalani, R. Sang, R. Breiman, 2008, The American journal of tropical medicine and hygiene.

The epidemiology and estimated etiology of pathogens detected from the upper respiratory tract of adults with severe acute respiratory infections in multiple countries, 2014–2015

S. Lindstrom, J. Montgomery, N. Shang, 2020, PloS one.

Influenza Surveillance Among Children With Pneumonia Admitted to a District Hospital in Coastal Kenya, 2007–2010

P. Cane, L. Hammitt, J. Scott, 2012, The Journal of infectious diseases.

Menstrual cups and sanitary pads to reduce school attrition, and sexually transmitted and reproductive tract infections: a cluster randomised controlled feasibility study in rural Western Kenya

Duolao Wang, P. Phillips-Howard, J. Vulule, 2016, BMJ Open.

A Preliminary Study of Pneumonia Etiology Among Hospitalized Children in Kenya

Dustin G Gibson, David R Murdoch, D. Murdoch, 2012, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Surveillance of respiratory viruses at health facilities from across Kenya, 2014

C. Agoti, D. Nokes, P. Munywoki, 2022, Wellcome Open Research.

Prevalence of Salmonella in Stool During the Vaccine Impact on Diarrhea in Africa (VIDA) Study, 2015–2018

K. Neuzil, J. Platts-Mills, Jieng-Lung Liu, 2023, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Epidemiology of Enteroaggregative, Enteropathogenic, and Shiga Toxin–Producing Escherichia coli Among Children Aged <5 Years in 3 Countries in Africa, 2015–2018: Vaccine Impact on Diarrhea in Africa (VIDA) Study

J. Platts-Mills, Jieng-Lung Liu, E. Houpt, 2023, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Characterising the taxonomic composition of children and livestock gut microbiomes and of environmental samples and the potential role for household-level microbiome sharing in western Kenya

E. Borenstein, O. Manor, D. Call, 2016 .

Added Value of an Oropharyngeal Swab in Detection of Viruses in Children Hospitalized with Lower Respiratory Tract Infection

L. Hammitt, J. Scott, D. Nokes, 2011, Journal of Clinical Microbiology.

Burden of Invasive Nontyphoidal Salmonella Disease in a Rural and Urban Site in Kenya, 2009-2014.

J. Montgomery, J. Verani, B. Fields, 2015, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Rotavirus group A genotype circulation patterns across Kenya before and after nationwide vaccine introduction, 2010–2018

J. Tate, U. Parashar, C. Agoti, 2020, BMC Infectious Diseases.

Prevalence and functional profile of SARS-CoV-2 T cells in asymptomatic Kenyan adults

C. Dutertre, A. Bertoletti, D. Lye, 2023, The Journal of clinical investigation.

Heterogenous transmission and seroprevalence of SARS-CoV-2 in two demographically diverse populations with low vaccination uptake in Kenya, March and June 2021

P. Munywoki, C. Ochieng, B. Juma, 2023, Gates Open Research.