Matthew C. Cieslak

发表

Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome.

A. Christie, Vittoria Roncalli, Meredith E. Stanhope, 2017, General and comparative endocrinology.

Glutathione S-Transferase (GST) Gene Diversity in the Crustacean Calanus finmarchicus – Contributors to Cellular Detoxification

Y. Passamaneck, A. Christie, P. Lenz, 2015, PloS one.

Postponing development: dormancy in the earliest developmental stages of a high-latitude calanoid copepod

D. Hartline, A. Castelfranco, P. Lenz, 2022, Journal of Plankton Research.

Physiological characterization of the emergence from diapause: A transcriptomics approach

P. Lenz, R. Hopcroft, C. Clarke, 2018, Scientific Reports.

Identification and developmental expression of the enzymes responsible for dopamine, histamine, octopamine and serotonin biosynthesis in the copepod crustacean Calanus finmarchicus.

A. Christie, P. Lenz, Vittoria Roncalli, 2014, General and comparative endocrinology.

Molecular evidence for an intrinsic circadian pacemaker in the cardiac ganglion of the American lobster, Homarus americanus - Is diel cycling of heartbeat frequency controlled by a peripheral clock system?

A. Christie, Vittoria Roncalli, Meredith E. Stanhope, 2018, Marine genomics.

Complementary mechanisms for neurotoxin resistance in a copepod

D. Hartline, P. Lenz, Vittoria Roncalli, 2017, Scientific Reports.

t-Distributed Stochastic Neighbor Embedding (t-SNE): A tool for eco-physiological transcriptomic analysis.

Daniel K Hartline, D. Hartline, A. Castelfranco, 2019, Marine genomics.

Capital Breeding in a Diapausing Copepod: A Transcriptomics Analysis

P. Lenz, R. Hopcroft, Vittoria Roncalli, 2020, Frontiers in Marine Science.

Physiological characterization of the emergence from diapause: A transcriptomics approach

P. Lenz, R. Hopcroft, C. Clarke, 2018, Scientific Reports.

Transcriptomics and metatranscriptomics in zooplankton: wave of the future?

D. Hartline, P. Lenz, Vittoria Roncalli, 2020, Journal of Plankton Research.

De Novo Assembly of a Transcriptome for Calanus finmarchicus (Crustacea, Copepoda) – The Dominant Zooplankter of the North Atlantic Ocean

R. P. Hassett, D. Hartline, A. Christie, 2014, PloS one.

A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health

D. Hartline, A. Christie, P. Lenz, 2017, PloS one.

Circadian signaling in Homarus americanus: Region-specific de novo assembled transcriptomes show that both the brain and eyestalk ganglia possess the molecular components of a putative clock system.

A. Christie, Vittoria Roncalli, Meredith E. Stanhope, 2018, Marine genomics.

Prediction of a peptidome for the ecotoxicological model Hyalella azteca (Crustacea; Amphipoda) using a de novo assembled transcriptome.

A. Christie, P. Lenz, Vittoria Roncalli, 2018, Marine genomics.

DataLad: distributed system for joint management of code, data, and their relationship

Simon B. Eickhoff, Jean-Baptiste Poline, Yaroslav O. Halchenko, 2021, J. Open Source Softw..

Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense

P. Lenz, Vittoria Roncalli, Matthew C. Cieslak, 2016, Scientific Reports.

Post-diapause transcriptomic restarts: insight from a high-latitude copepod

D. Hartline, A. Castelfranco, P. Lenz, 2021, BMC genomics.

Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod

D. Hartline, A. Tarrant, A. Castelfranco, 2021, Communications biology.

Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod

D. Hartline, A. Tarrant, A. Castelfranco, 2021, Communications Biology.

Regional heterogeneity impacts gene expression in the subarctic zooplankter Neocalanus flemingeri in the northern Gulf of Alaska

P. Lenz, R. Hopcroft, Vittoria Roncalli, 2019, Communications Biology.

De novo transcriptome assembly of the calanoid copepod Neocalanus flemingeri: A new resource for emergence from diapause.

P. Lenz, R. Hopcroft, Vittoria Roncalli, 2017, Marine genomics.

Regional heterogeneity impacts gene expression in the subarctic zooplankter Neocalanus flemingeri in the northern Gulf of Alaska.

P. Lenz, R. Hopcroft, Vittoria Roncalli, 2019 .

Diffusible gas transmitter signaling in the copepod crustacean Calanus finmarchicus: identification of the biosynthetic enzymes of nitric oxide (NO), carbon monoxide (CO) and hydrogen sulfide (H2S) using a de novo assembled transcriptome.

A. Christie, P. Lenz, Vittoria Roncalli, 2014, General and comparative endocrinology.

De novo transcriptomes of six calanoid copepods (Crustacea): a resource for the discovery of novel genes

D. Hartline, A. Castelfranco, P. Lenz, 2023, Scientific data.

First De Novo Transcriptome of the Copepod Rhincalanus gigas from Antarctic Waters

Luca Ambrosino, A. Ianora, C. Lauritano, 2020, Biology.

Physiological acclimatization in high‐latitude zooplankton

A. Castelfranco, P. Lenz, R. Hopcroft, 2022, Molecular ecology.

Transcriptomic analysis reveals responses to a polluted sediment in the Mediterranean copepod Acartia clausi.

I. Buttino, A. Gallo, Y. Carotenuto, 2023, Environmental pollution.

Acoustics and photo-identification provide new insights on killer whale presence and movements when interacting with longline fisheries in South East Australia

M. Hindell, J. Arnould, P. Tixier, 2021 .

PennLINC/qsiprep_paper: Publication Version

Matt Cieslak, Matthew C. Cieslak, 2021 .