S. Chowdhury

发表

Dual-Stage Neutral Loss Tandem Mass Spectrometric Strategy for Confident Identification of Protein Prenylation.

Z. Fang, S. Chowdhury, 2021, Analytical chemistry.

Profiling Protein-Protein Interactions and Protein Structures Using Chemical Cross-linking and Mass

S. Chowdhury, 2014 .

Identification of cross-linked peptides after click-based enrichment using sequential collision-induced dissociation and electron transfer dissociation tandem mass spectrometry.

Ronald J. Moore, Richard D. Smith, J. Adkins, 2009, Analytical chemistry.

Multi-species comparisons of snakes identify coordinated signalling networks underlying post-feeding intestinal regeneration

Drew R. Schield, S. Secor, T. Castoe, 2019, Proceedings of the Royal Society B.

A Mass Spectrometry-Cleavable N-Terminal Tagging Strategy for System-Level Protease Activity Profiling

F. Foss, P. Thapa, Z. Fang, 2020 .

Improved in-solution trypsin digestion method for Methanol-Chloroform precipitated cellular proteomics sample.

A. Kamal, Z. Fang, S. Chowdhury, 2020, Journal of separation science.

Evaluation of chemical labeling methods for identifying functional arginine residues of proteins by mass spectrometry.

S. Chowdhury, Maheshika S K Wanigasekara, 2016, Analytica chimica acta.

Arginine-Selective Chemical Labeling Approach for Identification and Enrichment of Reactive Arginine Residues in Proteins

A. Bugarin, S. Chowdhury, J. K. Chakrabarty, 2018, ACS Omega.

Solid-phase N-terminal peptide enrichment study by optimizing trypsin proteolysis on homoarginine-modified proteins by mass spectrometry.

J. Bruce, G. Munske, S. Chowdhury, 2014, Rapid communications in mass spectrometry : RCM.

Proteomics Network Analysis of Polarized Macrophages.

A. Kamal, S. Chowdhury, J. K. Chakrabarty, 2020, Methods in molecular biology.

Identification of Inflammatory Proteomics Networks of Toll-like Receptor 4 through Immunoprecipitation-Based Chemical Cross-Linking Proteomics

A. Kamal, S. Chowdhury, J. K. Chakrabarty, 2022, Proteomes.

Collisionally activated dissociation and electron capture dissociation of several mass spectrometry-identifiable chemical cross-linkers.

J. Bruce, Xiaoting Tang, G. Munske, 2006, Analytical chemistry.

Stereodefined synthesis of O3'-labeled uracil nucleosides. 3'-[(17)O]-2'-Azido-2'-deoxyuridine 5'-diphosphate as a probe for the mechanism of inactivation of ribonucleotide reductases.

S. Wnuk, M. Robins, S. Chowdhury, 2002, The Journal of organic chemistry.

Proteomic investigation of a diseased gorgonian coral indicates disruption of essential cell function and investment in inflammatory and other immune processes.

L. Mydlarz, A. Kamal, V. Brinkhuis, 2019, Integrative and comparative biology.

Use of high-throughput mass spectrometry to elucidate host-pathogen interactions in Salmonella.

Richard D. Smith, J. Adkins, K. Rodland, 2008, Future microbiology.

Mass spectrometry cleavable strategy for identification and differentiation of prenylated peptides.

R. Bhawal, A. Bugarin, Ruchika P Bhawal, 2015, Analytical chemistry.

High Confidence Identification of Cross-Linked Peptides by an Enrichment-Based Dual Cleavable Cross-Linking Technology and Data Analysis tool Cleave-XL.

Sandhya C Sadananda, S. Chowdhury, J. K. Chakrabarty, 2020, Journal of the American Society for Mass Spectrometry.

Identification of an integrated stress and growth response signaling switch that directs vertebrate intestinal regeneration

Drew R. Schield, S. Secor, T. Castoe, 2022, BMC genomics.

A new maleimide-bound acid-cleavable solid-support reagent for profiling phosphorylation.

J. Bruce, G. Munske, W. Siems, 2005, Rapid communications in mass spectrometry : RCM.

Globular domain structure and function of restriction-like-endonuclease LINEs: similarities to eukaryotic splicing factor Prp8

S. Christensen, Saiful M. Chowdhury, M. M. Mahbub, 2017, Mobile DNA.

Proteomic Investigation of the Time Course Responses of RAW 264.7 Macrophages to Infection with Salmonella enterica

Richard D. Smith, J. Adkins, T. Clauss, 2009, Infection and Immunity.

Mass Spectrometry-Cleavable Protein N-Terminal Tagging Strategy for System-Level Protease Activity Profiling.

F. Foss, P. Thapa, Z. Fang, 2021, Journal of the American Society for Mass Spectrometry.

The cell-surface protein composition of a coral symbiont, Breviolum psygmophilum, reveals a mechanism for host specificity and displays dynamic regulation during temperature stress

L. Mydlarz, A. Kamal, Contessa A. Ricci, 2020, Marine Biology.

Cross-linking Proteomics Indicates Effects of Simvastatin on the TLR2 Interactome and Reveals ACTR1A as a Novel Regulator of the TLR2 Signal Cascade*

J. Aloor, M. Fessler, A. Kamal, 2019, Molecular & Cellular Proteomics.

Cross-linking Proteomics Indicates Effects of Simvastatin on the TLR2 Interactome and Reveals ACTR1A as a Novel Regulator of the TLR2 Signal Cascade*

J. Aloor, M. Fessler, A. Kamal, 2019, Molecular & Cellular Proteomics.

Comparative and network-based proteomic analysis of low dose ethanol- and lipopolysaccharide-induced macrophages

M. Fessler, A. Kamal, Saiful M. Chowdhury, 2018, PloS one.

Inflammatory Proteomic Network Analysis of Statin-treated and Lipopolysaccharide-activated Macrophages

S. N. Udden, A. Kamal, M. Zaki, 2018, Scientific Reports.

The prohibitin complex regulates macrophage fatty acid composition, plasma membrane packing, and lipid raft-mediated inflammatory signaling.

P. Neufer, J. Fenton, K. Gowdy, 2023, Prostaglandins, leukotrienes, and essential fatty acids.

Affinity and chemical enrichment strategies for mapping low-abundance protein modifications and protein-interaction networks.

Z. Fang, S. Chowdhury, Aurchie Rahman, 2020, Journal of separation science.

Evaluating the performance of an ETD-cleavable cross-linking strategy for elucidating protein structures.

A. Bugarin, S. Chowdhury, J. K. Chakrabarty, 2020, Journal of proteomics.

Differential Tandem Mass Spectrometry-Based Cross-Linker: A New Approach for High Confidence in Identifying Protein Cross-Linking.

M. Fessler, G. Munske, Saiful M Chowdhury, 2016, Analytical chemistry.

Proteomic Analysis of ABCA1-Null Macrophages Reveals a Role for Stomatin-Like Protein-2 in Raft Composition and Toll-Like Receptor Signaling*

K. Tomer, J. Aloor, M. Fessler, 2015, Molecular & Cellular Proteomics.

A method for investigating protein-protein interactions related to salmonella typhimurium pathogenesis.

Ronald J. Moore, Richard D. Smith, J. Adkins, 2009, Journal of proteome research.

Evaluation of low energy CID and ECD fragmentation behavior of mono-oxidized thio-ether bonds in peptides

James E Bruce, J. Bruce, G. Munske, 2007, Journal of the American Society for Mass Spectrometry.

Gas-Phase Fragmentation Behavior of Oxidized Prenyl Peptides by CID and ETD Tandem Mass Spectrometry

R. Bhawal, S. Chowdhury, A. D. Shahinuzzaman, 2017, Journal of The American Society for Mass Spectrometry.

Evaluation of Different Stationary Phases in the Separation of Inter-Cross-Linked Peptides.

K. Schug, Yehia Z. Baghdady, Z. Fang, 2019, Journal of proteome research.

Inflammatory Proteomic Network Analysis of Statin-treated and Lipopolysaccharide-activated Macrophages

S. N. Udden, A. Kamal, M. Zaki, 2018, Scientific Reports.

Xlink-identifier: an automated data analysis platform for confident identifications of chemically cross-linked peptides using tandem mass spectrometry.

Gordon A Anderson, Nathan P Manes, Joshua N Adkins, 2011, Journal of proteome research.