Silvio C. E. Tosatto

发表

The RING 2.0 web server for high quality residue interaction networks

Silvio C. E. Tosatto, Damiano Piovesan, Giovanni Minervini, 2016, Nucleic Acids Res..

SODA: prediction of protein solubility from disorder and aggregation propensity

Silvio C. E. Tosatto, Damiano Piovesan, Lisanna Paladin, 2017, Nucleic Acids Res..

Bluues server: electrostatic properties of wild-type and mutated protein structures

Silvio C. E. Tosatto, Giovanni Minervini, Ian Walsh, 2012, Bioinform..

REPETITA: detection and discrimination of the periodicity of protein solenoid repeats by discrete Fourier transform

Silvio C. E. Tosatto, Flavio Seno, Antonio Trovato, 2009, Bioinform..

MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2017, Nucleic Acids Res..

In silico blood genotyping from exome sequencing data

Silvio C. E. Tosatto, Carlo Ferrari, Giovanni Minervini, 2012, AIMM.

Conformational diversity analysis reveals three functional mechanisms in proteins

Silvio C. E. Tosatto, Alexander Miguel Monzon, Gustavo D. Parisi, 2017, PLoS Comput. Biol..

Genotype-phenotype relations of the von Hippel-Lindau tumor suppressor inferred from a large-scale analysis of disease mutations and interactors

Silvio C. E. Tosatto, Giovanni Minervini, Federica Quaglia, 2018, bioRxiv.

Mobi 2.0: an improved method to define intrinsic disorder, mobility and linear binding regions in protein structures

Silvio C. E. Tosatto, Damiano Piovesan, Damiano Piovesan, 2018, Bioinform..

InterPro in 2017—beyond protein family and domain annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Huaiyu Mi, 2016, Nucleic Acids Res..

RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures

Silvio C. E. Tosatto, Miguel A. Andrade-Navarro, Damiano Piovesan, 2017, Nucleic Acids Res..

FRASS: the web-server for RNA structural comparison

Silvio C. E. Tosatto, Svetlana Kirillova, Oliviero Carugo, 2010, BMC Bioinformatics.

MobiDB‐lite: fast and highly specific consensus prediction of intrinsic disorder in proteins

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2017, Bioinform..

The Origin of Personalized Medicine and the Systems Biology Revolution

Silvio C. E. Tosatto, Rosario Rizzuto, Marco Carraro, 2017 .

MobiDB: a comprehensive database of intrinsic protein disorder annotations

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2012, Bioinform..

Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines

Silvio C. E. Tosatto, Alessandro Vullo, Gianluca Pollastri, 2006, Nucleic Acids Res..

FELLS: fast estimator of latent local structure

Silvio C. E. Tosatto, Damiano Piovesan, Giovanni Minervini, 2017, Bioinform..

Analysis and consensus of currently available intrinsic protein disorder annotation sources in the MobiDB database

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2013, BMC Bioinformatics.

ESpritz: accurate and fast prediction of protein disorder

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2012, Bioinform..

CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs

Silvio C. E. Tosatto, Alessandro Vullo, Gianluca Pollastri, 2011, Nucleic Acids Res..

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures

Silvio C. E. Tosatto, Tomás Di Domenico, Carlo Ferrari, 2012, Bioinform..

TAP score: torsion angle propensity normalization applied to local protein structure evaluation

Silvio C. E. Tosatto, Roberto Battistutta, S. Tosatto, 2007, BMC Bioinformatics.

Correct machine learning on protein sequences: a peer-reviewing perspective

Silvio C. E. Tosatto, Gianluca Pollastri, Ian Walsh, 2016, Briefings Bioinform..

The Pfam protein families database in 2019

Silvio C. E. Tosatto, Robert D. Finn, Sean R. Eddy, 2018, Nucleic Acids Res..

Assessing predictors for new post translational modification sites: A case study on hydroxylation

Silvio C. E. Tosatto, Damiano Piovesan, Alexander Miguel Monzon, 2020, bioRxiv.

Decomposing protein networks into domain-domain interactions

Silvio C. E. Tosatto, Thomas Lengauer, Mario Albrecht, 2005, ECCB/JBI.

Exploring Conformational Space with Thermal Fluctuations Obtained by Normal-Mode Analysis

Silvio C. E. Tosatto, Gustavo D. Parisi, Tadeo E. Saldaño, 2020, J. Chem. Inf. Model..

Softwarethe web-server for RNA structural comparison

Silvio C. E. Tosatto, Svetlana Kirillova, Oliviero Carugo, 2010 .

The Victor C++ library for protein representation and advanced manipulation

Silvio C. E. Tosatto, Damiano Piovesan, Carlo Ferrari, 2015, Bioinform..

A decoy set for the thermostable subdomain from chicken villin headpiece, comparison of different free energy estimators

Silvio C. E. Tosatto, Giorgio Colombo, Federico Fogolari, 2005, BMC Bioinformatics.

Comprehensive large-scale assessment of intrinsic protein disorder

Silvio C. E. Tosatto, Tomás Di Domenico, Carlo Ferrari, 2015, Bioinform..

MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2014, Nucleic Acids Res..

TESE: generating specific protein structure test set ensembles

Silvio C. E. Tosatto, Francesco Sirocco, 2008, Bioinform..

PANADA: Protein Association Network Annotation, Determination and Analysis

Silvio C. E. Tosatto, Tomás Di Domenico, Alberto J. M. Martin, 2013, PloS one.

Improving the quality of protein structure models by selecting from alignment alternatives

Stefano Toppo, Silvio C. E. Tosatto, Thomas Lengauer, 2006, BMC Bioinform..

PhytoTypeDB: a database of plant protein inter-cultivar variability and function

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2018, Database J. Biol. Databases Curation.

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Tapio Salakoski, Feng Zhang, Paolo Fontana, 2019, Genome Biology.

The Victor/FRST Function for Model Quality Estimation

Silvio C. E. Tosatto, S. Tosatto, 2005, J. Comput. Biol..

RepeatsDB-lite: a web server for unit annotation of tandem repeat proteins

Silvio C. E. Tosatto, Damiano Piovesan, Lisanna Paladin, 2018, Nucleic Acids Res..

Where differences resemble: sequence-feature analysis in curated databases of intrinsically disordered proteins

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2018, Database J. Biol. Databases Curation.

INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity

Silvio C. E. Tosatto, Damiano Piovesan, Carlo Ferrari, 2015, Nucleic Acids Res..

MOBI: a web server to define and visualize structural mobility in NMR protein ensembles

Silvio C. E. Tosatto, Ian Walsh, Alberto J. M. Martin, 2010, Bioinform..

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Robert D. Finn, 2018, Nucleic Acids Res..

Tools and data services registry: a community effort to document bioinformatics resources

Silvio C. E. Tosatto, Anthony Bretaudeau, Burkhard Rost, 2015, Nucleic Acids Res..

RepeatsDB: a database of tandem repeat protein structures

Silvio C. E. Tosatto, Damiano Piovesan, Tomás Di Domenico, 2013, Nucleic Acids Res..

RING: networking interacting residues, evolutionary information and energetics in protein structures

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2011, Bioinform..

PASTA 2.0: an improved server for protein aggregation prediction

Silvio C. E. Tosatto, Flavio Seno, Antonio Trovato, 2014, Nucleic Acids Res..

The MemMoRF database for recognizing disordered protein regions interacting with cellular membranes

Silvio C. E. Tosatto, Zsuzsanna Dosztányi, Tamás Hegedüs, 2020, Nucleic Acids Res..

RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2020, Nucleic Acids Res..

MobiDB: intrinsically disordered proteins in 2021

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2020, Nucleic Acids Res..

Ab initio protein structure prediction with MOLEGO

Silvio C. E. Tosatto, Reinhard Männer, Jürgen Hesser, 1999 .

DisProt: intrinsic protein disorder annotation in 2020

Silvio C. E. Tosatto, Arne Elofsson, Marco Necci, 2019, Nucleic Acids Res..

Ab Initio Loop Modeling with Precalculated Synthetic Loops and Sidechain Placement

Silvio C. E. Tosatto, Reinhard Männer, Jürgen Hesser, 2001 .

A comprehensive assessment of long intrinsic protein disorder from the DisProt database

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2018, Bioinform..

RUBI: rapid proteomic-scale prediction of lysine ubiquitination and factors influencing predictor performance

Silvio C. E. Tosatto, Tomás Di Domenico, Ian Walsh, 2013, Amino Acids.

DisProt 7.0: a major update of the database of disordered proteins

Sonia Longhi, Silvio C. E. Tosatto, Arne Elofsson, 2016, Nucleic Acids Res..

Protein function prediction using guilty by association from interaction networks

Silvio C. E. Tosatto, Damiano Piovesan, Manuel Giollo, 2015, Amino Acids.

Using community events to increase quality and adoption of standards: the case of Bioschemas

Silvio C. E. Tosatto, Graziano Pesole, Rafael C. Jimenez, 2018 .

Secondary Structure and Function Based Protein Fold Recognition

Silvio C. E. Tosatto, Reinhard Männer, Jürgen Hesser, 2001 .

CNTNAP2 mutations and autosomal dominant epilepsy with auditory features

Silvio C. E. Tosatto, R. Michelucci, S. Tosatto, 2018, Epilepsy Research.

The Gene Ontology knowledgebase in 2023

Silvio C. E. Tosatto, Steven J. Marygold, J. Blake, 2023, Genetics.

Whole-Exome Sequencing Identifies Pathogenic Variants in TJP1 Gene Associated With Arrhythmogenic Cardiomyopathy

Silvio C. E. Tosatto, D. Corrado, D. Husser, 2018, Circulation. Genomic and precision medicine.

Mapping pathogenic mutations suggests an innovative structural model for the pendrin (SLC26A4) transmembrane domain.

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2017, Biochimie.

Antagonistic effect of cyclin-dependent kinases and a calcium-dependent phosphatase on polyglutamine-expanded androgen receptor toxic gain of function

Silvio C. E. Tosatto, Eric N. Anderson, A. Ballabio, 2023, Science advances.

Electric dipole reorientation in the interaction of botulinum neurotoxins with neuronal membranes

Silvio C. E. Tosatto, S. Tosatto, F. Fogolari, 2009, FEBS letters.

Characterization of the pVHL Interactome in Human Testis Using High-Throughput Library Screening

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2021, Cancers.

QMEAN: A comprehensive scoring function for model quality assessment

Silvio C. E. Tosatto, P. Benkert, Dietmar Schomburg, 2008, Proteins.

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

Tapio Salakoski, Paolo Fontana, Silvio C. E. Tosatto, 2016, Genome Biology.

The InterPro protein families and domains database: 20 years on

Silvio C. E. Tosatto, Cathy H. Wu, Gustavo A. Salazar, 2020, Nucleic Acids Res..

Pfam: The protein families database in 2021

Silvio C. E. Tosatto, Gustavo A. Salazar, E. Sonnhammer, 2020, Nucleic Acids Res..

Correct machine learning on protein sequences: a peer-reviewing perspective

Silvio C. E. Tosatto, G. Pollastri, Ian Walsh, 2016, Briefings Bioinform..

Evolutionary and structural insights into the multifaceted glutathione peroxidase (Gpx) superfamily.

Stefano Toppo, Silvio C. E. Tosatto, Silvio C E Tosatto, 2008, Antioxidants & redox signaling.

The catalytic site of glutathione peroxidases.

Silvio C. E. Tosatto, S. Toppo, F. Ursini, 2008, Antioxidants & redox signaling.

The thioredoxin specificity of Drosophila GPx: a paradigm for a peroxiredoxin-like mechanism of many glutathione peroxidases.

Stefano Toppo, Silvio C. E. Tosatto, Pierluigi Mauri, 2007, Journal of molecular biology.

Looking for putative phenoloxidases of compound ascidians: haemocyanin-like proteins in Polyandrocarpa misakiensis and Botryllus schlosseri.

Silvio C. E. Tosatto, S. Tosatto, N. Franchi, 2012, Developmental and comparative immunology.

Unfoldome variation upon plant-pathogen interactions: strawberry infection by Colletotrichum acutatum

Silvio C. E. Tosatto, A. Cestaro, S. Tosatto, 2015, Plant Molecular Biology.

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins

Silvio C. E. Tosatto, M. Y. Lobanov, Md. Wasi Ul Kabir, 2023, Nucleic Acids Res..

LGI1 mutations in autosomal dominant and sporadic lateral temporal epilepsy

Silvio C. E. Tosatto, P. Striano, R. Michelucci, 2009, Human mutation.

Large‐scale analysis of intrinsic disorder flavors and associated functions in the protein sequence universe

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2016, Protein science : a publication of the Protein Society.

Exploring Protein Intrinsic Disorder with MobiDB.

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2020, Methods in molecular biology.

HIF1α-dependent induction of the mitochondrial chaperone TRAP1 regulates bioenergetic adaptations to hypoxia

Silvio C. E. Tosatto, G. Colombo, E. Moroni, 2020, Cell Death & Disease.

Dynamic scaffolds for neuronal signaling: in silico analysis of the TANC protein family

Silvio C. E. Tosatto, S. Tosatto, A. Gasparini, 2017, Scientific Reports.

InterPro in 2022

Silvio C. E. Tosatto, Cathy H. Wu, Gustavo A. Salazar, 2022, Nucleic Acids Res..

Exploration of alternative splicing events in ten different grapevine cultivars

Silvio C. E. Tosatto, Y. van de Peer, R. Velasco, 2015, BMC Genomics.

The PASTA server for protein aggregation prediction.

Silvio C. E. Tosatto, F. Seno, A. Trovato, 2007, Protein engineering, design & selection : PEDS.

Structural in silico dissection of the collagen V interactome to identify genotype–phenotype correlations in classic Ehlers–Danlos Syndrome (EDS)

Silvio C. E. Tosatto, L. Paladin, G. Minervini, 2015, FEBS letters.

MobiDB-lite 3.0: fast consensus annotation of intrinsic disorder flavors in proteins

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2020, Bioinform..

Secretion-Positive LGI1 Mutations Linked to Lateral Temporal Epilepsy Impair Binding to ADAM22 and ADAM23 Receptors

Silvio C. E. Tosatto, S. Tosatto, L. Vitiello, 2016, PLoS genetics.

Expanding the clinical-pathological and genetic spectrum of RYR1-related congenital myopathies with cores and minicores: an Italian population study

Silvio C. E. Tosatto, E. Bertini, M. Pane, 2022, Acta neuropathologica communications.

The f subunit of human ATP synthase is essential for normal mitochondrial morphology and permeability transition.

Silvio C. E. Tosatto, V. Giorgio, G. Lippe, 2021, Cell reports.

Ca2+ binding to F‐ATP synthase β subunit triggers the mitochondrial permeability transition

Silvio C. E. Tosatto, V. Giorgio, G. Lippe, 2017, EMBO reports.

“Protein” no longer means what it used to

Silvio C. E. Tosatto, P. Tompa, M. Fornasari, 2021, Current research in structural biology.

Ensembles from ordered and disordered proteins reveal similar structural constraints during evolution

Silvio C. E. Tosatto, A. M. Monzon, M. Fornasari, 2018, bioRxiv.

Disorder transitions and conformational diversity cooperatively modulate biological function in proteins

Silvio C. E. Tosatto, Alexander Miguel Monzon, Diego J. Zea, 2016, Protein science : a publication of the Protein Society.

Critical assessment of protein intrinsic disorder prediction (CAID) ‐ Results of round 2

Silvio C. E. Tosatto, Damiano Piovesan, Adel Bouhraoua, 2023, Proteins.

FuzPred: a web server for the sequence-based prediction of the context-dependent binding modes of proteins

Silvio C. E. Tosatto, M. Vendruscolo, João M. C. Teixeira, 2023, Nucleic Acids Res..

2mit, an Intronic Gene of Drosophila melanogaster timeless2, Is Involved in Behavioral Plasticity

Silvio C. E. Tosatto, S. Tosatto, R. Costa, 2013, PloS one.

Insights into the molecular features of the von Hippel–Lindau-like protein

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2018, Amino Acids.

VHLdb: A database of von Hippel-Lindau protein interactors and mutations

Silvio C. E. Tosatto, Damiano Piovesan, S. Tosatto, 2016, Scientific Reports.

Assessing computational predictions of the phenotypic effect of cystathionine‐beta‐synthase variants

Silvio C. E. Tosatto, Predrag Radivojac, Mauno Vihinen, 2019, Human mutation.

FuzDB: a new phase in understanding fuzzy interactions

Silvio C. E. Tosatto, Damiano Piovesan, M. Fuxreiter, 2021, Nucleic Acids Res..

The SSEA server for protein secondary structure alignment

Silvio C. E. Tosatto, P. Fontana, S. Toppo, 2005, Bioinform..

MANIFOLD: protein fold recognition based on secondary structure, sequence similarity and enzyme classification.

Silvio C. E. Tosatto, Jürgen Hesser, Matthias Heiler, 2003, Protein engineering.

Critical assessment of protein intrinsic disorder prediction

Silvio C. E. Tosatto, Marco Necci, Damiano Piovesan, 2020, Nature Methods.

A STRP-ed definition of Structured Tandem Repeats in Proteins.

Silvio C. E. Tosatto, Damiano Piovesan, A. Elofsson, 2023, Journal of structural biology.

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation

Silvio C. E. Tosatto, Cristina Marino Buslje, Konstantinos D. Tsirigos, 2021, Nucleic Acids Res..

DisProt in 2024: improving function annotation of intrinsically disordered proteins

Silvio C. E. Tosatto, Damiano Piovesan, M. C. Aspromonte, 2023, Nucleic acids research.

Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions

Silvio C. E. Tosatto, Norman E. Davey, J. Hoch, 2023, Nature Methods.

Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

Silvio C. E. Tosatto, Andrew R. Jones, Tytus D. Mak, 2023, Journal of proteome research.

Pipeline for transferring annotations between proteins beyond globular domains

Silvio C. E. Tosatto, T. Gibson, Z. Dosztányi, 2022, bioRxiv.

Intrinsic protein disorder and conditional folding in AlphaFoldDB

Silvio C. E. Tosatto, Damiano Piovesan, A. M. Monzon, 2022, Protein science : a publication of the Protein Society.

MIADE metadata guidelines: Minimum Information About a Disorder Experiment

Silvio C. E. Tosatto, Norman E. Davey, J. Hoch, 2022, bioRxiv.

SARS‐CoV‐2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2022, The FEBS journal.

Exploring Manually Curated Annotations of Intrinsically Disordered Proteins with DisProt

Silvio C. E. Tosatto, Damiano Piovesan, Federica Quaglia, 2020, Current protocols in bioinformatics.

APICURON: a database to credit and acknowledge the work of biocurators

Silvio C. E. Tosatto, Damiano Piovesan, Federica Quaglia, 2021, bioRxiv.

PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins

Silvio C. E. Tosatto, Tadeo E. Saldaño, Ana Julia Velez Rueda, 2020, Nucleic acids research.

An intrinsically disordered proteins community for ELIXIR

Silvio C. E. Tosatto, Richard J. Edwards, Norman E. Davey, 2019, F1000Research.

In silico investigation of PHD‐3 specific HIF1‐α proline 567 hydroxylation: A new player in the VHL/HIF‐1α interaction pathway?

Silvio C. E. Tosatto, S. Moro, S. Tosatto, 2013, FEBS letters.

Identification and In Silico Analysis of Novel von Hippel‐Lindau (VHL) Gene Variants from a Large Population

Silvio C. E. Tosatto, S. Tosatto, A. Murgia, 2011, Annals of human genetics.

Adding structural information to the von Hippel–Lindau (VHL) tumor suppressor interaction network

Silvio C. E. Tosatto, S. Tosatto, A. Murgia, 2009, FEBS letters.

A divide and conquer approach to fast loop modeling.

Eckart Bindewald, Silvio C. E. Tosatto, Reinhard Männer, 2002, Protein engineering.

Global and local model quality estimation at CASP8 using the scoring functions QMEAN and QMEANclust

Silvio C. E. Tosatto, Torsten Schwede, Silvio C E Tosatto, 2009, Proteins.

Heterozygous reelin mutations cause autosomal-dominant lateral temporal epilepsy.

Silvio C. E. Tosatto, P. Striano, R. Michelucci, 2015, American journal of human genetics.

Computational analysis of prolyl hydroxylase domain-containing protein 2 (PHD2) mutations promoting polycythemia insurgence in humans

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2016, Scientific Reports.

Disentangling the complexity of low complexity proteins

Silvio C. E. Tosatto, Dariusz Plewczynski, Aleksandra Gruca, 2019, Briefings Bioinform..

The role of the N-terminal tail for the oligomerization, folding and stability of human frataxin☆

Silvio C. E. Tosatto, Javier Santos, J. M. Delfino, 2013, FEBS open bio.

Characterization of Intellectual disability and Autism comorbidity through gene panel sequencing

Silvio C. E. Tosatto, S. Tosatto, C. Marino-Buslje, 2019, bioRxiv.

CDKN2A Unclassified Variants in Familial Malignant Melanoma: Combining Functional and Computational Approaches for Their Assessment

Silvio C. E. Tosatto, S. Tognazzo, S. Tosatto, 2014, Human mutation.

CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

Silvio C. E. Tosatto, Julius O. B. Jacobsen, Nicholas A. Sinnott-Armstrong, 2024, Genome biology.

Intrinsic Protein Disorder, Conditional Folding and AlphaFold2

Silvio C. E. Tosatto, Damiano Piovesan, A. M. Monzon, 2022, bioRxiv.

Neurocognitive assessment and DNA sequencing expand the phenotype and genotype spectrum of Alström syndrome

Silvio C. E. Tosatto, C. Semenza, S. Tosatto, 2021, American journal of medical genetics. Part A.

Structural Characterization of Hypoxia Inducible Factor α—Prolyl Hydroxylase Domain 2 Interaction through MD Simulations

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2023, International journal of molecular sciences.

A targeted next-generation gene panel reveals a novel heterozygous nonsense variant in the TP63 gene in patients with arrhythmogenic cardiomyopathy.

Silvio C. E. Tosatto, D. Corrado, G. Thiene, 2019, Heart rhythm.

PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins

Silvio C. E. Tosatto, J. M. Hancock, Damiano Piovesan, 2020, Nucleic Acids Res..

The Victor C++ library for protein representation and advanced manipulation

Silvio C. E. Tosatto, Damiano Piovesan, Manuel Giollo, 2015, Bioinform..

FuzDrop on AlphaFold: visualizing the sequence-dependent propensity of liquid–liquid phase separation and aggregation of proteins

Silvio C. E. Tosatto, M. Vendruscolo, M. Fuxreiter, 2022, Nucleic Acids Res..

MobiDB: 10 years of intrinsically disordered proteins

Silvio C. E. Tosatto, Cristina Marino Buslje, Damiano Piovesan, 2022, Nucleic Acids Res..

PhaSePro: the database of proteins driving liquid–liquid phase separation

Silvio C. E. Tosatto, P. Tompa, Z. Dosztányi, 2019, Nucleic Acids Res..

In silico prediction of blood cholesterol levels from genotype data

Silvio C. E. Tosatto, Carlo Ferrari, Francesco Reggiani, 2018, bioRxiv.

BOOGIE: Predicting Blood Groups from High Throughput Sequencing Data

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2015, PloS one.

A novel SACS mutation results in non‐ataxic spastic paraplegia and peripheral neuropathy

Silvio C. E. Tosatto, S. Tosatto, F. Boaretto, 2013, European journal of neurology.

Inhibitory interaction of the 14-3-3 proteins with ubiquitous (PMCA1) and tissue-specific (PMCA3) isoforms of the plasma membrane Ca2+ pump.

Silvio C. E. Tosatto, S. Tosatto, M. Brini, 2008, Cell calcium.

The Aquila Digital Community The Aquila Digital Community

Silvio C. E. Tosatto, Karin M. Verspoor, David A. Lee, 2022 .

Tools and data services registry: a community effort to document bioinformatics resources

Silvio C. E. Tosatto, Radka Svobodová Vareková, Victor de la Torre, 2015, Nucleic Acids Res..

Best practices for the manual curation of intrinsically disordered proteins in DisProt

Silvio C. E. Tosatto, Damiano Piovesan, A. Chasapi, 2023, Database J. Biol. Databases Curation.

The repetitive structure of DNA clamps: an overlooked protein tandem repeat.

Silvio C. E. Tosatto, Damiano Piovesan, A. M. Monzon, 2023, Journal of structural biology.

Comparison of protein repeat classifications based on structure and sequence families.

Silvio C. E. Tosatto, Lisanna Paladin, Silvio C E Tosatto, 2015, Biochemical Society transactions.

Simultaneous quantification of protein order and disorder.

Sonia Longhi, Silvio C. E. Tosatto, A Keith Dunker, 2017, Nature chemical biology.

Structural insights into the function of human caveolin 1.

Silvio C. E. Tosatto, A. Cestaro, E. Spisni, 2005, Biochemical and Biophysical Research Communications - BBRC.

Simple consensus procedures are effective and sufficient in secondary structure prediction.

Giorgio Valle, Silvio C. E. Tosatto, Thomas Lengauer, 2003, Protein engineering.

Arg-8 of yeast subunit e contributes to the stability of F-ATP synthase dimers and to the generation of the full-conductance mitochondrial megachannel

Silvio C. E. Tosatto, G. Lippe, S. Tosatto, 2019, The Journal of Biological Chemistry.

High-Conductance Channel Formation in Yeast Mitochondria is Mediated by F-ATP Synthase e and g Subunits

Silvio C. E. Tosatto, V. Giorgio, G. Lippe, 2018, Cellular Physiology and Biochemistry.

Structural protein reorganization and fold emergence investigated through amino acid sequence permutations

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2014, Amino Acids.

RING 4.0: faster residue interaction networks with novel interaction types across over 35,000 different chemical structures

Silvio C. E. Tosatto, Damiano Piovesan, A. M. Monzon, 2024, Nucleic acids research.

Fly cryptochrome and the visual system

Silvio C. E. Tosatto, Alberto J. M. Martin, C. Helfrich-Förster, 2013, Proceedings of the National Academy of Sciences.

MobiDB: a comprehensive database of intrinsic protein disorder annotations

Silvio C. E. Tosatto, Alberto J. M. Martin, Ian Walsh, 2012, Bioinform..

STRPsearch: fast detection of structured tandem repeat proteins

Silvio C. E. Tosatto, Damiano Piovesan, A. M. Monzon, 2024, bioRxiv.

Identification of repetitive units in protein structures with ReUPred

Silvio C. E. Tosatto, Damiano Piovesan, Lisanna Paladin, 2016, Amino Acids.

DOME: recommendations for supervised machine learning validation in biology

Silvio C. E. Tosatto, J. Harrow, G. Pollastri, 2021, Nature Methods.

Functional Interaction of Phospholipid Hydroperoxide Glutathione Peroxidase with Sperm Mitochondrion-associated Cysteine-rich Protein Discloses the Adjacent Cysteine Motif as a New Substrate of the Selenoperoxidase*

Stefano Toppo, Silvio C. E. Tosatto, Pierluigi Mauri, 2005, Journal of Biological Chemistry.

Functional insights from the structural modelling of a small Fe-hydrogenase.

Giorgio Valle, Silvio C. E. Tosatto, Paola Costantini, 2006, Biochemical and biophysical research communications.

A Novel Missense Variant in MYL2 Gene Associated with Hypertrophic Cardiomyopathy Showing High Incidence of Restrictive Physiology.

Silvio C. E. Tosatto, A. Angelini, D. Corrado, 2020, Circulation. Genomic and precision medicine.

Protein function prediction using guilty by association from interaction networks

Silvio C. E. Tosatto, Damiano Piovesan, S. Tosatto, 2015, Amino Acids.

Network analysis of dynamically important residues in protein structures mediating ligand-binding conformational changes

Silvio C. E. Tosatto, Tadeo E. Saldaño, S. Tosatto, 2019, European Biophysics Journal.

In silico Characterization of Human Prion-Like Proteins: Beyond Neurological Diseases

Silvio C. E. Tosatto, P. Aloy, S. Tosatto, 2019, Front. Physiol..

Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI‐5 intellectual disability challenge

Silvio C. E. Tosatto, Stephen J. Wilson, Lipika R. Pal, 2019, Human mutation.

Characterization of intellectual disability and autism comorbidity through gene panel sequencing

Silvio C. E. Tosatto, S. Tosatto, C. Marino-Buslje, 2020, Human mutation.

Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges

Silvio C. E. Tosatto, Hui Ting Grace Yeo, Madeleine P. Ball, 2017, Human mutation.

The pVHL neglected functions, a tale of hypoxia-dependent and -independent regulations in cancer

Silvio C. E. Tosatto, M. Pennuto, S. Tosatto, 2020, Open Biology.

Novel interactions of the von Hippel-Lindau (pVHL) tumor suppressor with the CDKN1 family of cell cycle inhibitors

Silvio C. E. Tosatto, S. Tosatto, G. Minervini, 2017, Scientific Reports.

Insights into the proline hydroxylase (PHD) family, molecular evolution and its impact on human health.

Silvio C. E. Tosatto, F. Quaglia, Giovanni Minervini, 2015, Biochimie.