J. Brooks

发表

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

Hardik I. Parikh, Steven P. Bradley, Jennifer M. Fettweis, 2019, Nature Medicine.

Structure, Function and Diversity of the Healthy Human Microbiome

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

An accurate bacterial DNA quantification assay for HTS library preparation of human biological samples

A. Brand, Baneshwar Singh, S. Seashols-Williams, 2018, Electrophoresis.

Group Testing Matrix Design for PCR Screening with Real-Valued Measurements

M. Serrano, Seyran Saeedi, Tom J Arodz, 2022, J. Comput. Biol..

Differences in vaginal microbiome in African American women versus women of European ancestry.

Jennifer M. Fettweis, David J. Edwards, G. Buck, 2014, Microbiology.

Metabolic Networks and Modern Research Problems in Operations Research

Allen Holder, J. Paul Brooks, A. Holder, 2017 .

Enumeration and Cartesian Product Decomposition of Alternate Optimal Fluxes in Cellular Metabolism

Onur Seref, Stephen S. Fong, J. Paul Brooks, 2017, INFORMS J. Comput..

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies

Jennifer M. Fettweis, David J. Edwards, G. Buck, 2015, BMC Microbiology.

The changing landscape of the vaginal microbiome.

Jennifer M. Fettweis, G. Buck, K. Jefferson, 2014, Clinics in laboratory medicine.

Unique roles of vaginal Megasphaera phylotypes in reproductive health

Jennifer M. Fettweis, David J. Edwards, G. Buck, 2020, bioRxiv.

Species-level classification of the vaginal microbiome

Jennifer M. Fettweis, Gregory A Buck, G. Buck, 2012, BMC Genomics.

Multi-omic Microbiome Profiles in the Female Reproductive Tract in Early Pregnancy

Hardik I. Parikh, Jennifer M. Fettweis, David J. Edwards, 2019 .

The vaginal microbiome and preterm birth

Jonas Korlach, Stephen S Fong, Ekaterina Smirnova, 2019, Nature Medicine.

The vaginal microbiome and preterm birth

Hardik I. Parikh, Steven P. Bradley, David J. Edwards, 2019, Nature Medicine.

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

Hardik I. Parikh, Steven P. Bradley, David J. Edwards, 2019, Nature Medicine.

An Emerging Mycoplasma Associated with Trichomoniasis, Vaginal Infection and Disease

Jennifer M. Fettweis, G. Buck, N. Sheth, 2014, PloS one.

Identification of a gene in Mycoplasma hominis associated with preterm birth and microbial burden in intraamniotic infection.

Jennifer M. Fettweis, G. Buck, R. Romero, 2015, American journal of obstetrics and gynecology.

Proteomics-based metabolic modeling and characterization of the cellulolytic bacterium Thermobifida fusca

Yu Deng, Stephen S. Fong, J. Paul Brooks, 2014, BMC Systems Biology.

Metabolic characterization of the chitinolytic bacterium Serratia marcescens using a genome-scale metabolic model

Qiang Yan, Stephen S. Fong, J. Paul Brooks, 2019, BMC Bioinformatics.

Changes in vaginal community state types reflect major shifts in the microbiome

Gregory A. Buck, Zeev Waks, Chen Yanover, 2017, Microbial ecology in health and disease.

Challenges for case-control studies with microbiome data.

J Paul Brooks, J. Brooks, 2016, Annals of epidemiology.

Effects of combined oral contraceptives, depot medroxyprogesterone acetate and the levonorgestrel-releasing intrauterine system on the vaginal microbiome.

Jennifer M. Fettweis, David J. Edwards, N. Sheth, 2017, Contraception.

Gap Detection for Genome-Scale Constraint-Based Models

William P. Burns, Stephen S. Fong, J. Paul Brooks, 2012, Adv. Bioinformatics.

Genome-scale metabolic analysis of Clostridium thermocellum for bioethanol production

Stephen S. Fong, J. Paul Brooks, Christopher M. Gowen, 2010, BMC Systems Biology.

Association between statin use, the vaginal microbiome, and Gardnerella vaginalis vaginolysin-mediated cytotoxicity

Steven P. Bradley, G. Buck, N. Sheth, 2017, PloS one.

A bacterial signature-based method for the identification of seven forensically relevant human body fluids.

A. Brand, Baneshwar Singh, S. Seashols-Williams, 2023, Forensic science international. Genetics.

Metabolic Profile of the Cellulolytic Industrial Actinomycete Thermobifida fusca

Stephen S. Fong, Niti Vanee, J. Paul Brooks, 2017, Metabolites.

The Vaginal Microbiome: Disease, Genetics and the Environment

Seth B. Roberts, M. Neale, L. Eaves, 2010, Nature Precedings.

Machine learning clustering and classification of human microbiome source body sites.

Baneshwar Singh, S. Seashols-Williams, J. Brooks, 2021, Forensic science international.

Metabolic characterization of the chitinolytic bacterium Serratia marcescens using a genome-scale metabolic model

Seth B. Roberts, S. Fong, Q. Yan, 2019, BMC Bioinformatics.

Identification of a gene in Mycoplasma hominis associated with preterm birth and microbial burden in intraamniotic infection.

Jennifer M. Fettweis, R. Romero, T. Chaiworapongsa, 2015, American journal of obstetrics and gynecology.