E. N. Nikolova

发表

A conformational switch in the zinc finger protein Kaiso mediates differential readout of specific and methylated DNA sequences.

H. Dyson, P. Wright, R. Stanfield, 2020, Biochemistry.

CH···O Hydrogen Bonds Mediate Highly Specific Recognition of Methylated CpG Sites by the Zinc Finger Protein Kaiso.

H. Dyson, P. Wright, R. Stanfield, 2018, Biochemistry.

Structural Plasticity of Pioneer Factor Sox2 and DNA Bendability Modulate Nucleosome Engagement and Sox2-Oct4 Synergism.

E. N. Nikolova, Fabiana C. Malaga Gadea, 2022, Journal of molecular biology.

Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings.

D. Case, Loïc Salmon, H. Al‐Hashimi, 2015, Journal of the American Chemical Society.

Characterizing RNA dynamics at atomic resolution using solution-state NMR spectroscopy

Jeetender Chugh, H. Al‐Hashimi, Jameson R Bothe, 2011, Nature Methods.

m1A and m1G Potently Disrupt A-RNA Structure Due to the Intrinsic Instability of Hoogsteen Base Pairs

Gianmarc Grazioli, Ioan Andricioaei, Hashim M. Al-Hashimi, 2016, Nature Structural &Molecular Biology.

Widespread transient Hoogsteen base pairs in canonical duplex DNA with variable energetics

H. Al‐Hashimi, Heidi Alvey, E. N. Nikolova, 2014, Nature Communications.

Probing sequence-specific DNA flexibility in a-tracts and pyrimidine-purine steps by nuclear magnetic resonance (13)C relaxation and molecular dynamics simulations.

Ioan Andricioaei, I. Andricioaei, H. Al‐Hashimi, 2012, Biochemistry.

Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR

H. Al‐Hashimi, E. N. Nikolova, 2009, Journal of biomolecular NMR.

Transient Hoogsteen Base Pairs in Canonical Duplex DNA

I. Andricioaei, H. Al‐Hashimi, P. O'Brien, 2011, Nature.

The Double Helix in Motion: New Insights into Sequence-specific, Functional DNA Dynamics Using NMR Spectroscopy

E. N. Nikolova, 2011 .

A historical account of Hoogsteen base-pairs in duplex DNA.

H. Al‐Hashimi, Huiqing Zhou, Isaac J. Kimsey, 2013, Biopolymers.

Nucleosome topology and DNA sequence modulate the engagement of pioneer factors SOX2 and OCT4

E. N. Nikolova, Fabiana C. Malaga Gadea, 2022, bioRxiv.

Single VS ribozyme molecules reveal dynamic and hierarchical folding toward catalysis.

Shawna L. Hiley, M. J. Pereira, N. Walter, 2008, Journal of molecular biology.

Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution.

H. Al‐Hashimi, E. N. Nikolova, Federico L Gottardo, 2012, Journal of the American Chemical Society.

Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.

C. Brooks, H. Al‐Hashimi, Garrett B. Goh, 2013, Journal of the American Chemical Society.

Extending the range of microsecond-to-millisecond chemical exchange detected in labeled and unlabeled nucleic acids by selective carbon R(1rho) NMR spectroscopy.

H. Al‐Hashimi, Anette Casiano-Negroni, Alexandar L. Hansen, 2009, Journal of the American Chemical Society.

Intrinsic dynamics of DNA-polymer complexes: a mechanism for DNA release.

H. Al‐Hashimi, M. B. Banaszak Holl, Lisa E. Prevette, 2012, Molecular pharmaceutics.

Intrinsic dynamics of DNA-polymer complexes: a mechanism for DNA release.

H. Al‐Hashimi, Lisa E. Prevette, E. N. Nikolova, 2012, Molecular pharmaceutics.

Thermodynamics of RNA melting, one base pair at a time.

H. Al‐Hashimi, E. Nikolova, Evgenia N Nikolova, 2010, RNA.

Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.

C. Brooks, H. Al‐Hashimi, Garrett B. Goh, 2013, Journal of the American Chemical Society.

Guanine to Inosine Substitution Leads to Large Increases in the Population of a Transient G·C Hoogsteen Base Pair

H. Al‐Hashimi, E. N. Nikolova, Frederick W. Stull, 2014, Biochemistry.