O. Awile

M ODERNIZING THE NEURON S IMULATOR FOR S USTAINABILITY , P ORTABILITY , AND P ERFORMANCE

James G. King, S. Dura-Bernal, M. Hines, 2022 .

Modernizing the NEURON Simulator for Sustainability, Portability, and Performance

James G. King, S. Dura-Bernal, M. Hines, 2022, bioRxiv.

Structural adaptation of Nudix hydrolase in the desiccation resistant bacterium Deinococcus radiodurans

I. Sbalzarini, B. Zagrovic, A. Kriško, 2008 .

Intrinsically Disordered Regions May Lower the Hydration Free Energy in Proteins: A Case Study of Nudix Hydrolase in the Bacterium Deinococcus radiodurans

Ivo F. Sbalzarini, Omar Awile, Bojan Zagrovic, 2010, PLoS Comput. Biol..

MOD2IR: High-Performance Code Generation for a Biophysically Detailed Neuronal Simulation DSL

P. Kumbhar, F. Schürmann, A. Donaldson, 2023, CC.

STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale

James G. King, E. De Schutter, P. Kumbhar, 2022, bioRxiv.

An Optimizing Multi-platform Source-to-source Compiler Framework for the NEURON MODeling Language

James G. King, Michael L. Hines, Omar Awile, 2019, ICCS.

Modeling and Simulation of Neocortical Micro- and Mesocircuitry. Part II: Physiology and Experimentation

Michael W. Reimann, Jorge Blanco Alonso, James B. Isbister, 2023, bioRxiv.

A domain-specific language and scalable middleware for particle-mesh simulations on heterogeneous parallel computers

Omar Awile, O. Awile, 2013 .

Modeling and Simulation of Neocortical Micro- and Mesocircuitry. Part II: Physiology and Experimentation

Michael W. Reimann, Jorge Blanco Alonso, Christian A. Rössert, 2024, bioRxiv.

Editorial: Neuroscience, computing, performance, and benchmarks: Why it matters to neuroscience how fast we can compute

James C. Knight, M. Diesmann, T. Nowotny, 2023, Frontiers in Neuroinformatics.

Parallelizing and Optimizing LHCb-Kalman for Intel Xeon Phi KNL Processors

Omar Awile, José Daniel García Sánchez, Javier Fernández, 2018, 2018 26th Euromicro International Conference on Parallel, Distributed and Network-based Processing (PDP).

Fast neighbor lists for adaptive-resolution particle simulations

Ivo F. Sbalzarini, Omar Awile, Sylvain Reboux, 2012, Comput. Phys. Commun..