Michael Lidschreiber

发表

Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells

H. Schöler, P. Cramer, Jinmi Choi, 2022, eLife.

Maps the Interaction Landscape of the Mediator

H. Fröhlich, P. Cramer, M. Lidschreiber, 2012 .

The Spt5 C-Terminal Region Recruits Yeast 3′ RNA Cleavage Factor I

Patrick Cramer, Michael Lidschreiber, Andreas Mayer, 2012, Molecular and Cellular Biology.

NASC-seq monitors RNA synthesis in single cells

R. Sandberg, P. Cramer, A. Larsson, 2018, Nature Communications.

Monitoring mRNA metabolism

P. Cramer, B. Schwalb, K. Maier, 2015 .

Transcriptionally active enhancers in human cancer cells

P. Cramer, J. Taipale, L. A. Jung, 2021, Molecular systems biology.

RNA-dependent chromatin association of transcription elongation factors and Pol II CTD kinases

P. Cramer, M. Lidschreiber, P. Torkler, 2017, eLife.

RNA polymerase II termination involves CTD tyrosine dephosphorylation by CPF subunit Glc7

P. Cramer, L. Passmore, S. Etzold, 2014, Nature Structural &Molecular Biology.

RNA polymerase II termination involves C-terminal-domain tyrosine dephosphorylation by CPF subunit Glc 7

P. Cramer, L. Passmore, S. Etzold, 2014 .

Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue

P. Cramer, B. Strahl, M. Lidschreiber, 2013, Proceedings of the National Academy of Sciences.

Transcription activation depends on the length of the RNA polymerase II C‐terminal domain

P. Cramer, X. Darzacq, B. Schwalb, 2021, The EMBO journal.

Genome-wide occupancy profiling of the RNA polymerase II transcription machinery in S. cerevisiae.

M. Lidschreiber, Michael Lidschreiber, 2013 .

Sequence determinants of human gene regulatory elements

P. Cramer, C. Daub, T. Kivioja, 2021, Nature Genetics.

Real-time Transcriptional Profiling of Cellular and Viral Gene Expression during Lytic Cytomegalovirus Infection

Thomas Bonfert, Caroline C. Friedel, Ralf Zimmer, 2012, PLoS pathogens.

The APT complex is involved in non-coding RNA transcription and is distinct from CPF

P. Cramer, L. Passmore, M. Lidschreiber, 2018, Nucleic acids research.

Cap Completion and C-Terminal Repeat Domain Kinase Recruitment Underlie the Initiation-Elongation Transition of RNA Polymerase II

Patrick Cramer, Michael Lidschreiber, P. Cramer, 2013, Molecular and Cellular Biology.

Polymerase II Initiation-Elongation Transition of RNA Domain Kinase Recruitment Underlie the Cap Completion and C-Terminal Repeat

P. Cramer, K. Leike, Michael Lidschreiber, 2013 .

Efficient RNA polymerase II pause release requires U2 snRNP function.

P. Cramer, B. Schwalb, J. Schmitzová, 2021, Molecular cell.

The Cdk8 kinase module regulates interaction of the mediator complex with RNA polymerase II

P. Cramer, H. Urlaub, K. Maier, 2021, The Journal of biological chemistry.

Uniform transitions of the general RNA polymerase II transcription complex

Johannes Söding, Patrick Cramer, Michael Lidschreiber, 2010, Nature Structural &Molecular Biology.

Distinct transcription kinetics of pluripotent cell states

P. Cramer, Katja Lidschreiber, S. Elsässer, 2022, Molecular systems biology.

Newly synthesized RNA Sequencing Characterizes Transcription Dynamics in Three Pluripotent States

P. Cramer, Katja Lidschreiber, S. Elsässer, 2021, bioRxiv.

The pentatricopeptide repeat protein Rmd9 recognizes the dodecameric element in the 3′-UTRs of yeast mitochondrial mRNAs

P. Cramer, D. Temiakov, M. Anikin, 2021, Proceedings of the National Academy of Sciences.

Cap completion and CTD kinase recruitment underlie the initiation

P. Cramer, K. Leike, Michael Lidschreiber, 2013 .

Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes.

J. Söding, P. Cramer, J. Andreani, 2017, Molecular cell.

Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes Graphical

J. Söding, P. Cramer, J. Andreani, 2017 .

Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation

P. Cramer, Š. Vaňáčová, R. Stefl, 2014, Molecular cell.

, RNA Cleavage Factor I ′ 3 The Spt 5 C-Terminal Region Recruits Yeast

P. Cramer, A. Mayer, K. Leike, 2012 .

CTD Tyrosine Phosphorylation Impairs Termination Factor Recruitment to RNA Polymerase II

Patrick Cramer, Dirk Eick, Michael Lidschreiber, 2012, Science.

The RNA Polymerase II C-terminal Domain-interacting Domain of Yeast Nrd1 Contributes to the Choice of Termination Pathway and Couples to RNA Processing by the Nuclear Exosome*

P. Cramer, A. Mayer, Minkyu Kim, 2013, The Journal of Biological Chemistry.

Reciprocal Regulation of Protein Synthesis and Carbon Metabolism for Thylakoid Membrane Biogenesis

Christian Schwarz, Michael Lidschreiber, C. Schwarz, 2013, PLoS biology.

Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle

Achim Tresch, Julien Gagneur, Benedikt Zacher, 2014, Molecular systems biology.

Oct4 primarily controls enhancer activity rather than accessibility

H. Schöler, P. Cramer, Jinmi Choi, 2021, bioRxiv.

Molecular Cell Alternative Binding of Nrd 1 to RNAPII CTD and Trf

P. Cramer, Š. Vaňáčová, R. Stefl, 2014 .

RNA Cleavage Factor I ' 3Spt5 C-Terminal Region Recruits Yeast

P. Cramer, A. Mayer, K. Leike, 2014 .

Annotation of genomics data by the bidirectional hidden Markov model unveils variations in Pol II transcription cycle

J. Gagneur, P. Cramer, Benedikt Zacher, 2015 .

Structural basis of transcription reduction by a promoter-proximal +1 nucleosome

C. Dienemann, P. Cramer, F. Grabbe, 2023, Molecular cell.

Tyrosine Phosphorylation Impairs Termination Factor Recruitment to RNA Polymerase II

P. Cramer, E. Kremmer, A. Mayer, 2012 .

Perturbed epigenetic transcriptional regulation in AML with IDH mutations causes increased susceptibility to NK cells

P. Cramer, A. Lennartsson, M. Jagodic, 2023, Leukemia.

The Mediator complex regulates enhancer-promoter interactions

A. M. Oudelaar, Taras Velychko, Abrar Aljahani, 2022, bioRxiv.

Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle

J. Gagneur, P. Cramer, Benedikt Zacher, 2014 .

MC EMiNEM Maps the Interaction Landscape of the Mediator

Holger Fröhlich, Achim Tresch, Dietmar E. Martin, 2012, PLoS Comput. Biol..

The Spt5 C-Terminal Region Recruits Yeast 3′ RNA Cleavage Factor I

P. Cramer, A. Mayer, K. Leike, 2012, Molecular and Cellular Biology.

Molecular Systems Biology Peer Review Process File Annotation of Genomics Data Using Bidirectional Hidden Markov Models Unveils Variations in Pol Ii Transcription Cycle Transaction Report

J. Gagneur, P. Cramer, A. Tresch, 2022 .

CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release.

B. Schwalb, I. Parfentev, Shona Murphy, 2024, Molecular cell.

Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.

C. Dienemann, L. Farnung, Michael Lidschreiber, 2024, Molecular cell.