Thomas G. Gilgenast

发表

Systematic evaluation of statistical methods for identifying looping interactions in 5C data

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, 2017, bioRxiv.

3DeFDR: Identifying cell type-specific looping interactions with empirical false discovery rate guided thresholding

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Lindsey Rose Fernandez, 2018, bioRxiv.

LADL: Light-activated dynamic looping for endogenous gene expression control

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Jacqueline A. Valeri, 2018, Nature Methods.

Disease-Associated Short Tandem Repeats Co-localize with Chromatin Domain Boundaries

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Flora Tassone, 2018, Cell.

3DeFDR: statistical methods for identifying cell type-specific looping interactions in 5C and Hi-C data

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Lindsey R. Fernandez, 2020, Genome Biology.

Alteration of genome folding via contact domain boundary insertion

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Hardison, 2020, Nature genetics.

Chromatin Structure Dynamics During the Mitosis to G1-Phase Transition

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Hardison, 2019, Nature.

Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Gur, 2022, Nature Neuroscience.

Acetylated Chromatin Domains Link Chromosomal Organization to Cell- and Circuit-level Dysfunction in Schizophrenia and Bipolar Disorder

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Gur, 2021, bioRxiv.

Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming.

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Job Dekker, 2016, Cell stem cell.

Alteration of genome folding via contact domain boundary insertion

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Hardison, 2020, Nature Genetics.

Re-configuration of Chromatin Structure During the Mitosis-G1 Phase Transition

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, R. Hardison, 2019, bioRxiv.

Genetic drivers of repeat expansion disorders localize to 3-D chromatin domain boundaries

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Jonathan A. Beagan, 2017, bioRxiv.

The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries.

Perry Evans, Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, 2017, Molecular cell.

Schizophrenia-associated somatic copy number variants from 12,834 cases reveal contribution to risk and recurrent, isoform-specific NRXN1 disruptions

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, J. Sebat, 2022, medRxiv.

Systematic Evaluation of Statistical Methods for Identifying Looping Interactions in 5C Data.

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, Jennifer E Phillips-Cremins, 2019, Cell systems.

Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions

Sara B. Linker, Evan Z. Macosko, Thomas G. Gilgenast, 2023, Cell genomics.

Schizophrenia-associated somatic copy number variants from 12,834 cases reveal 1 contribution to risk and recurrent, isoform-specific NRXN1 disruptions 2

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, J. Sebat, 2021 .

Schizophrenia-associated somatic copy number variants from 12,834 cases reveal 1 contribution to risk and recurrent, isoform-specific NRXN1 disruptions 2

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, J. Sebat, 2021 .

Schizophrenia-associated somatic copy number variants from 12,834 cases reveal 1 contribution to risk and recurrent, isoform-specific NRXN1 disruptions 2

Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, J. Sebat, 2021 .