Ali M. Farhat

c-di-GMP modulates type IV MSHA pilus retraction and surface attachment in Vibrio cholerae

G. Wong, Shiwei Zhu, Y. Brun, 2020, Nature Communications.

Mapping biochemical states associated with HP1 target recognition at sites of heterochromatin formation in living cells AUTHORS

Peter L. Freddolino, J. Biteen, Ziyuan Chen, 2021 .

HP1 oligomerization compensates for low-affinity H3K9me recognition and provides a tunable mechanism for heterochromatin-specific localization

Peter L. Freddolino, J. Biteen, Ziyuan Chen, 2021, bioRxiv.

Predicting Host Phenotype Based on Gut Microbiome Using a Convolutional Neural Network Approach

Derek Reiman, Yang Dai, Ali M Farhat, 2021, Artificial Neural Networks, 3rd Edition.

Modeling cell-specific dynamics and regulation of the common gamma chain cytokines

Aaron S. Meyer, Scott M. Carlson, Ali M. Farhat, 2019, bioRxiv.

H3K9 methylation enhances HP1-associated epigenetic silencing complex assembly and suppresses off-chromatin binding

Peter L. Freddolino, J. Biteen, Ziyuan Chen, 2023 .

Tracking live-cell single-molecule dynamics enables measurements of heterochromatinassociated protein-protein interactions

J. Biteen, Ziyuan Chen, Saikat Biswas, 2023, bioRxiv.