Brock C. Christensen

发表

Preliminary Evaluation of the Utility of Deep Generative Histopathology Image Translation at a Mid-sized NCI Cancer Center

Joshua J. Levy, Christopher R. Jackson, Aravindhan Sriharan, 2020, BIOINFORMATICS.

methyLiftover: cross-platform DNA methylation data integration

E. Andres Houseman, Brock C. Christensen, Alexander J. Titus, 2016, Bioinform..

PyMethylProcess - highly parallelized preprocessing for DNA methylation array data

Joshua J. Levy, Brock C. Christensen, Alexander J. Titus, 2019, bioRxiv.

Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions

Margaret R. Karagas, Ru-Fang Yeh, Joseph Wiemels, 2008, BMC Bioinformatics.

Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL)

Devin C. Koestler, John K. Wiencke, Michael S. Kobor, 2016, BMC Bioinformatics.

An Automated and Modular Deep Learning Approach for DNA Methylation Analysis

Joshua J. Levy, Brock C. Christensen, Alexander J. Titus, 2019 .

MethylNet: an automated and modular deep learning approach for DNA methylation analysis

Joshua J. Levy, Brock C. Christensen, Alexander J. Titus, 2020, BMC Bioinformatics.

Topological Feature Extraction and Visualization of Whole Slide Images using Graph Neural Networks

Joshua J. Levy, Brock C. Christensen, Louis J. Vaickus, 2020 .

DNA methylation arrays as surrogate measures of cell mixture distribution

Devin C. Koestler, John K. Wiencke, E. Andres Houseman, 2012, BMC Bioinformatics.

OxyBS: estimation of 5-methylcytosine and 5-hydroxymethylcytosine from tandem-treated oxidative bisulfite and bisulfite DNA

E. Andres Houseman, Brock C. Christensen, Kevin C. Johnson, 2016, Bioinform..

Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data

Devin C. Koestler, John K. Wiencke, Karl T. Kelsey, 2019 .

Longevity Associated Geometry Identified in Satellite Images: Sidewalks, Driveways and Hiking Trails pdf

Anne G. Hoen, Joshua J. Levy, Brock C. Christensen, 2020, ArXiv.

Copy number variation has little impact on bead-array-based measures of DNA methylation

Margaret R. Karagas, Joseph Wiemels, John K. Wiencke, 2009, Bioinform..

PathFlowAI: A Convenient High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology

Joshua J. Levy, Aravindhan Sriharan, Brock C. Christensen, 2019, medRxiv.

Semi-supervised recursively partitioned mixture models for identifying cancer subtypes

Devin C. Koestler, Margaret R. Karagas, E. Andres Houseman, 2010, Bioinform..

MedZIM: Mediation analysis for Zero-Inflated Mediators with applications to microbiome data

Susmita Datta, Margaret R. Karagas, Zhigang Li, 2019 .

A New Dimension of Breast Cancer Epigenetics - Applications of Variational Autoencoders with DNA Methylation

Brock C. Christensen, Alexander J. Titus, Carly A. Bobak, 2018, BIOINFORMATICS.

Preliminary Evaluation of the Utility of Deep Generative Histopathology Image Translation at a Mid-Sized NCI Cancer Center

Christopher R. Jackson, Joshua J. Levy, Christopher R. Jackson, 2020, bioRxiv.

PathFlow-MixMatch for Whole Slide Image Registration: An Investigation of a Segment-Based Scalable Image Registration Method

Joshua J. Levy, Christopher R. Jackson, Brock C. Christensen, 2020 .

Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms

Margaret R. Karagas, Mark R. Segal, Ru-Fang Yeh, 2008, 2008 International Conference on BioMedical Engineering and Informatics.

IFAA: Robust Association Identification and Inference for Absolute Abundance in Microbiome Analyses

Hongzhe Li, Margaret R. Karagas, Juliette C. Madan, 2019, Journal of the American Statistical Association.

Genetic and Epigenetic Somatic Alterations in Head and Neck Squamous Cell Carcinomas Are Globally Coordinated but Not Locally Targeted

John K. Wiencke, E. Andres Houseman, Karl T. Kelsey, 2010, PloS one.

Normal breast tissue DNA methylation differences at regulatory elements are associated with the cancer risk factor age

E. Andres Houseman, Brock C. Christensen, Kevin C. Johnson, 2017, Breast Cancer Research.

A Large-Scale Internal Validation Study of Unsupervised Virtual Trichrome Staining Technologies on Non-alcoholic Steatohepatitis Liver Biopsies

Joshua J. Levy, Brock C. Christensen, Louis J. Vaickus, 2020 .