D. Leek

发表

A common protocol for the simultaneous processing of multiple clinically relevant bacterial species for whole genome sequencing

S. Peacock, N. Brown, K. Raven, 2021, Scientific reports.

Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis

J. Parkhill, S. Peacock, N. Brown, 2020, The Lancet. Microbe.

Evaluation of a fully automated bioinformatics tool to predict antibiotic resistance from MRSA genomes

J. Parkhill, P. Rhodes, S. Peacock, 2020, The Journal of antimicrobial chemotherapy.

Defining metrics for whole-genome sequence analysis of MRSA in clinical practice

J. Parkhill, S. Peacock, E. Bragin, 2020, Microbial genomics.

Pilot Evaluation of a Fully Automated Bioinformatics System for Analysis of Methicillin-Resistant Staphylococcus aureus Genomes and Detection of Outbreaks

J. Parkhill, P. Rhodes, S. Peacock, 2019, Journal of Clinical Microbiology.

Rapid sequencing of MRSA direct from clinical plates in a routine microbiology laboratory

J. Parkhill, S. Peacock, N. Brown, 2019, The Journal of antimicrobial chemotherapy.

Methodology for Whole-Genome Sequencing of Methicillin-Resistant Staphylococcus aureus Isolates in a Routine Hospital Microbiology Laboratory

J. Betley, Louise J. Fraser, P. Kokko-Gonzales, 2019, Journal of Clinical Microbiology.

Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study

Joshua B. Singer, Darren L. Smith, Shane A. McCarthy, 2021, The Lancet Infectious Diseases.

Methodology for whole genome sequencing of MRSA in a routine hospital microbiology laboratory.

J. Betley, Louise J. Fraser, P. Kokko-Gonzales, 2019 .

Large-Scale Evaluation of a Rapid Fully Automated Analysis Platform to Detect and Refute Outbreaks Based on MRSA Genome Comparisons

J. Parkhill, P. Rhodes, S. Peacock, 2022, mSphere.

Pilot evaluation of a fully automated bioinformatics system for the analysis of MRSA genomes and detection of outbreaks

J. Parkhill, P. Rhodes, N. Brown, 2019 .

Exponential growth, high prevalence of SARS-CoV-2, and vaccine effectiveness associated with the Delta variant

Graham W. Taylor, Joshua B. Singer, Darren L. Smith, 2021, Science.

Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

Graham W. Taylor, Joshua B. Singer, Scott M Elliott, 2021, Nature.

SARS-CoV-2 evolution during treatment of chronic infection

Graham W. Taylor, William L. Hamilton, Joshua B. Singer, 2021, Nature.

Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7

William T. Harvey, Graham W. Taylor, William L. Hamilton, 2021, Cell Reports.

Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission

Graham W. Taylor, Scott M Elliott, Jaime M. Tovar-Corona, 2022, Nature Communications.

SARS-CoV-2 evolution during treatment of chronic infection

Graham W. Taylor, William L. Hamilton, Joshua B. Singer, 2021, Nature.

Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

Graham W. Taylor, William L. Hamilton, Joshua B. Singer, 2021, Nature.

Methodology for whole genome sequencing of MRSA in a routine hospital

J. Betley, Louise J. Fraser, P. Kokko-Gonzales, 2019 .

Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B.1.1.7: an ecological study

Joshua B. Singer, David A. Drew, Scott M Elliott, 2021, The Lancet. Public health.