Tristan Cragnolini

WEBnm@ v2.0: Web server and services for comparing protein flexibility

Lars Skjærven, Nathalie Reuter, Edvin Fuglebakk, 2014, BMC Bioinformatics.

RNA structure prediction including pseudoknots through direct enumeration of states

Lucy J. Colwell, Michael P. Brenner, Tristan Cragnolini, 2018, bioRxiv.

Epock: rapid analysis of protein pocket dynamics

Matthieu Chavent, Marc Baaden, Mark S. P. Sansom, 2014, Bioinform..

UnityMol: interactive and ludic visual manipulation of coarse-grained RNA and other biomolecules

Marc Baaden, Samuela Pasquali, Antoine Taly, 2015, 2015 IEEE 1st International Workshop on Virtual and Augmented Reality for Molecular Science (VARMS@IEEEVR).

Ab initio RNA folding

Samuela Pasquali, Philippe Derreumaux, Tristan Cragnolini, 2014, Journal of physics. Condensed matter : an Institute of Physics journal.

UnityMol: Interactive scientific visualization for integrative biology

Marc Baaden, Samuela Pasquali, Philippe Derreumaux, 2014, 2014 IEEE 4th Symposium on Large Data Analysis and Visualization (LDAV).

Coarse-Grained HiRE-RNA Model for ab Initio RNA Folding beyond Simple Molecules, Including Noncanonical and Multiple Base Pairings.

Samuela Pasquali, Philippe Derreumaux, Tristan Cragnolini, 2015, Journal of chemical theory and computation.

The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems.

Marc Baaden, Samuela Pasquali, Maria Kalimeri, 2014, Chemical Society reviews.

Cryo‐electron microscopy targets in CASP13: Overview and evaluation of results

Wah Chiu, Andriy Kryshtafovych, Bohdan Monastyrskyy, 2019, Proteins.

Multifunctional energy landscape for a DNA G-quadruplex: An evolved molecular switch.

Samuela Pasquali, David J Wales, Philippe Derreumaux, 2017, The Journal of chemical physics.