Eva Smorodina

发表

Protein Design: From the Aspect of Water Solubility and Stability

Shilei Hao, A. Zalevsky, D. Jin, 2022, Chemical reviews.

Development of a High-Affinity Antibody against the Tumor-Specific and Hyperactive 611-p95HER2 Isoform

V. Greiff, H. Russnes, Puneet Rawat, 2022, Cancers.

Comparing 2 crystal structures and 12 AlphaFold2-predicted human membrane glucose transporters and their water-soluble glutamine, threonine and tyrosine variants

Fei Tao, D. Jin, Rui Qing, 2022, QRB Discovery.

Structural informatic study of determined and AlphaFold2 predicted molecular structures of 13 human solute carrier transporters and their water-soluble QTY variants

Rui Qing, Shuguang Zhang, Eva Smorodina, 2022, Scientific Reports.

Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction

Ingrid Hobæk Haff, S. Hochreiter, R. Akbar, 2022, Nat. Comput. Sci..

Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies

R. Akbar, Philippe A. Robert, F. Lund-Johansen, 2022, mAbs.

Toward real-world automated antibody design with combinatorial Bayesian optimization

R. Akbar, Philippe A. Robert, V. Greiff, 2023, Cell reports methods.

Scalable biomimetic sensing system with membrane receptor dual-monolayer probe and graphene transistor arrays

U. Sleytr, Mantian Xue, Lidong Wu, 2023, Science advances.

Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for real-world antibody specificity prediction

Ingrid Hobæk Haff, S. Hochreiter, R. Akbar, 2021, bioRxiv.

Comparing Native Crystal Structures and AlphaFold2 Predicted Water-Soluble G Protein-Coupled Receptor QTY Variants

Shuguang Zhang, M. Skuhersky, Fei Tao, 2021, Life.

Structural bioinformatics studies of bacterial outer membrane beta-barrel transporters and their AlphaFold2 predicted water-soluble QTY variants

Shuguang Zhang, Eva Smorodina, Akash Sajeev-Sheeja, 2023, PloS one.

Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence

R. Akbar, Simen Tennøe, R. Stratford, 2023, Frontiers in immunology.

Structural bioinformatics studies of glutamate transporters and their AlphaFold2 predicted water-soluble QTY variants and uncovering the natural mutations of L->Q, I->T, F->Y and Q->L, T->I and Y->F

Shuguang Zhang, Eva Smorodina, Alper Karagöl, 2024, PloS one.

Assessing AF2’s ability to predict structural ensembles of proteins

A. H. Laustsen, Patrick K. Quoika, T. Jenkins, 2024, bioRxiv.