Ambrish Roy

发表

COFACTOR: an accurate comparative algorithm for structure-based protein function annotation

Yang Zhang, Jianyi Yang, Ambrish Roy, 2012, Nucleic Acids Res..

BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions

Yang Zhang, Jianyi Yang, Ambrish Roy, 2012, Nucleic Acids Res..

A Protocol for Computer-Based Protein Structure and Function Prediction

Dong Xu, Yang Zhang, Ambrish Roy, 2011, Journal of visualized experiments : JoVE.

Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment

Yang Zhang, Jianyi Yang, Ambrish Roy, 2013, Bioinform..

Protein Structure Prediction

Ambrish Roy, Yang Zhang, 2012 .

LIGSIFT: an open-source tool for ligand structural alignment and virtual screening

Jeffrey Skolnick, Ambrish Roy, 2015, Bioinform..

QAUST: protein function prediction using structure similarity search, protein interaction and functional sequence motifs

Xin Gao, Meshari Alazmi, Wei Chen, 2020 .

Molecular and Structural Basis of Drift in the Functions of Closely-Related Homologous Enzyme Domains: Implications for Function Annotation Based on Homology Searches and Structural Genomics

Narayanaswamy Srinivasan, Venkatraman S. Gowri, Ambrish Roy, 2009, Silico Biol..

PoLi: A Virtual Screening Pipeline Based on Template Pocket and Ligand Similarity

Jeffrey Skolnick, Ambrish Roy, Bharath Srinivasan, 2015, J. Chem. Inf. Model..

Prediction Methods and Reports

Dong Xu, Yang Zhang, Jian Zhang, 2011 .

Composite Approaches to Protein Tertiary Structure Prediction: A Case-Study by I-Tasser

Yang Zhang, Sitao Wu, Ambrish Roy, 2010 .

HAAD: A Quick Algorithm for Accurate Prediction of Hydrogen Atoms in Protein Structures

Yang Zhang, Ambrish Roy, Yang Zhang, 2009, PloS one.