Xiting Yan

Emerging insights in sarcoidosis: moving forward through reverse translational research.

C. D. Dela Cruz, L. Sharma, Angela Liu, 2022, American journal of physiology. Lung cellular and molecular physiology.

Metagenomic sequencing of the bronchoalveolar lavage extracellular virome and cellular transcriptome of sarcoidosis patients does not detect rubella virus

F. Bushman, K. Sullivan, E. Ghedin, 2022, Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG.

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge

Adam P. DeLuca, Matthew S. Lebo, Janeen L Andorf, 2014, Genome Biology.

Post-infectious inflammatory disease in MIS-C features elevated cytotoxicity signatures and autoreactivity that correlates with severity

W. Lau, D. Hafler, C. D. Dela Cruz, 2020, medRxiv.

Approaches for integrating heterogeneous RNA-seq data reveal cross-talk between microbes and genes in asthmatic patients

M. Gerstein, G. Weinstock, S. Lou, 2020, Genome Biology.

iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects

Zuoheng Wang, J. McDonough, G. Chupp, 2022, bioRxiv.

A novel Bayesian framework for harmonizing information across tissues and studies to increase cell type deconvolution accuracy

Jing Wang, M. Vukmirovic, Jiawei Wang, 2023, Briefings Bioinform..

Noninvasive determinants of pulmonary hypertension in interstitial lung disease

P. Heerdt, I. Singh, H. Oakland, 2023, Pulmonary circulation.

Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases

G. Clair, J. Sembrat, F. Ahangari, 2023, Research square.

Peripheral Blood Single-Cell Sequencing Uncovers Common and Specific Immune Aberrations in Fibrotic Lung Diseases

M. Selman, J. Schupp, A. Unterman, 2023, bioRxiv.