Farhan Quadir

Multi-head attention-based U-Nets for predicting protein domain boundaries using 1D sequence features and 2D distance maps

Jianlin Cheng, Zhiye Guo, S. Mahmud, 2022, BMC Bioinformatics.

A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers

Jianlin Cheng, Rajashree Roy, Elham Soltanikazemi, 2021, bioRxiv.

Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment

Jeffrey J. Gray, Panagiotis I. Koukos, Johnathan D. Guest, 2021, Proteins.

A deep reinforcement learning approach to reconstructing quaternary structures of protein dimers through self-learning

Jianlin Cheng, Rajashree Roy, Elham Soltanikazemi, 2022, bioRxiv.

Predicted structural proteome of Sphagnum divinum and proteome-scale annotation

Jerry M. Parks, Russell B. Davidson, J. Skolnick, 2023, Bioinform..

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Johnathan D. Guest, Adam K. Sieradzan, Charles W Christoffer, 2023, Proteins.

Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15

Tianqi Wu, Zhiye Guo, Chen Chen, 2023, Communications biology.

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

Jianlin Cheng, Chen Chen, Tianqi Wu, 2023, bioRxiv.