Shuwen Xiong

Towards a better understanding of TF-DNA binding prediction from genomic features

Jiliu Zhou, Yuhang Liu, Maocheng Wang, 2022, Comput. Biol. Medicine.

Uncovering the Relationship between Tissue-Specific TF-DNA Binding and Chromatin Features through a Transformer-Based Model

Yuhang Liu, Maocheng Wang, Yongqing Zhang, 2022, Genes.

Predicting cell type-specific effects of variants on TF-DNA binding by meta-learning

Q. Zou, Maocheng Wang, Yongqing Zhang, 2022, 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

MetaSEM: Gene Regulatory Network Inference from Single-Cell RNA Data by Meta-Learning

Q. Zou, Maocheng Wang, Yongqing Zhang, 2023, International journal of molecular sciences.

Densely Convolutional Neural Network for Transcription Factor Binding Sites Prediction Using DNA Sequence and Histone Modification

Beichen Li, Yongqing Zhang, Zixuan Wang, 2022, 2022 5th International Conference on Artificial Intelligence and Big Data (ICAIBD).

Local augmented graph neural network for multi-omics cancer prognosis prediction and analysis.

Q. Zou, Beichen Li, Yongqing Zhang, 2023, Methods.

A novel convolution attention model for predicting transcription factor binding sites by combination of sequence and shape

Jiliu Zhou, Q. Zou, Maocheng Wang, 2021, Briefings Bioinform..

HAMPLE: deciphering TF-DNA binding mechanism in different cellular environments by characterizing higher-order nucleotide dependency

Jiliu Zhou, Yongqing Zhang, Zixuan Wang, 2023, Bioinform..

Multiple sequence alignment based on deep reinforcement learning with self-attention and positional encoding

Naifeng Wen, Yongqing Zhang, Zixuan Wang, 2023, Bioinformatics.

Analyzing the Progress of China and the World in Achieving Sustainable Development Goals 7 and 13

M. A. Hossin, Hermas Abudu, Shuwen Xiong, 2023, Sustainability.