Sergey Sheetlin

发表

Mass Spectral Library Methods for Analysis of Site-Specific N-Glycosylation: Application to Human Milk Proteins.

Meghan C. Burke, Yuri A. Mirokhin, S. Markey, 2022, Journal of proteome research.

New finite-size correction for local alignment score distributions

Thomas L. Madden, T. Madden, J. Spouge, 2012, BMC Research Notes.

Objective method for estimating asymptotic parameters, with an application to sequence alignment.

J. Spouge, Yonil Park, S. Sheetlin, 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

J. Spouge, M. Frith, Yonil Park, 2008, Nucleic acids research.

Searching for repeats, as an example of using the generalised Ruzzo-Tompa algorithm to find optimal subsequences with gaps

John L. Spouge, Leonardo Mariño-Ramírez, Sergey Sheetlin, 2014, Int. J. Bioinform. Res. Appl..

Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements

Kannan Tharakaraman, John L. Spouge, David Landsman, 2006, BMC Bioinformatics.

Frameshift alignment: statistics and post-genomic applications

Martin C. Frith, John L. Spouge, Yonil Park, 2014, Bioinform..

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES.

Yonil Park, John L Spouge, Sergey Sheetlin, 2009, Annals of statistics.

Accelerated convergence and robust asymptotic regression of the Gumbel scale parameter for gapped sequence alignment

John L. Spouge, Yonil Park, J. Spouge, 2005 .

Increasing the coverage of a mass spectral library of milk oligosaccharides using a hybrid-search-based bootstrapping method and milks from a wide variety of mammals.

Yuri A. Mirokhin, Tytus D. Mak, S. Sheetlin, 2020, Analytical chemistry.

ALP & FALP: C++ libraries for pairwise local alignment E-values

Martin C. Frith, John L. Spouge, Yonil Park, 2015, Bioinform..

Alignments anchored on genomic landmarks can aid in the identification of regulatory elements

David Landsman, Kannan Tharakaraman, John L. Spouge, 2005, ISMB.

MsDetector: toward a standard computational tool for DNA microsatellites detection

Hani Z. Girgis, Sergey L. Sheetlin, Sergey Sheetlin, 2012, Nucleic acids research.

The identification of complete domains within protein sequences using accurate E-values for semi-global alignment

S. Bryant, J. Spouge, M. Kann, 2007, Nucleic acids research.

Comprehensive Analysis of Tryptic Peptides Arising from Disulfide Linkages in NISTmAb and Their Use for Developing a Mass Spectral Library

S. Sheetlin, S. Markey, S. Stein, 2021, Journal of proteome research.

The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment

John L. Spouge, Yonil Park, Sergey Sheetlin, 2005, Nucleic acids research.

Threshold Average Precision (TAP-k): a measure of retrieval designed for bioinformatics

John L. Spouge, Maricel G. Kann, Hyrum D. Carroll, 2010, Bioinform..

The ruzzo-tompa algorithm can find the maximal paths in weighted, directed graphs on a one-dimensional lattice

Leonardo Mariño-Ramírez, John L. Spouge, Sergey Sheetlin, 2012, 2012 IEEE 2nd International Conference on Computational Advances in Bio and medical Sciences (ICCABS).

Sensitive Method for the Confident Identification of Genetically Variant Peptides in Human Hair Keratin*

Meghan C. Burke, Yuri A. Mirokhin, Dmitrii V. Tchekhovskoi, 2019, Journal of forensic sciences.