Jiayi Dou

Parallelized identification of on- and off-target protein interactions.

David Baker, Jiayi Dou, Inna Goreshnik, 2020, Molecular systems design & engineering.

CSAR Benchmark Exercise 2013: Evaluation of Results from a Combined Computational Protein Design, Docking, and Scoring/Ranking Challenge

Richard D. Smith, Heather A. Carlson, David Baker, 2016, J. Chem. Inf. Model..

Generalized Bayesian Inference Nets Model and Diagnosis of Cardiovascular Diseases

Booma Devi Sekar, Ming-Chui Dong, Jiayi Dou, 2011, J. Intell. Syst..

Improving the Efficiency of Ligand-Binding Protein Design with Molecular Dynamics.

Rommie E. Amaro, David Baker, Rommie E Amaro, 2019, Journal of chemical theory and computation.

Computational design of ligand-binding proteins with high affinity and selectivity

David Baker, Barry L. Stoddard, Sagar D. Khare, 2013, Nature.

De novo design of a fluorescence-activating β-barrel

William Sheffler, Binchen Mao, Barry L. Stoddard, 2018, Nature.

Principles for designing proteins with cavities formed by curved β sheets

Gaohua Liu, Gaetano T. Montelione, Yuefeng Tang, 2017, Science.

Sampling and energy evaluation challenges in ligand binding protein design

David Baker, Barry L. Stoddard, Hahnbeom Park, 2017, Protein science : a publication of the Protein Society.

Computational Design of Transmembrane Pores

David Baker, Frank DiMaio, Yang Hsia, 2020, Nature.