Edward C. Uberbacher

发表

Alignments of DNA and protein sequences containing frameshift errors

Xiaojun Guan, Edward C. Uberbacher, 1996, Comput. Appl. Biosci..

Sequence comparison on a cluster of workstations using the PVM system

Xiaojun Guan, Edward C. Uberbacher, Richard J. Mural, 1995, Proceedings of 9th International Parallel Processing Symposium.

On Parallel Search of DNA Sequence Databases

Xiaojun Guan, Edward C. Uberbacher, Richard J. Mural, 1991, PPSC.

A polynomial-time algorithm for a class of protein threading problems

Ying Xu, Edward C. Uberbacher, 1996, Comput. Appl. Biosci..

GAP: A computer program for gene assembly

Edward C. Uberbacher, Richard J. Mural, R. C. Mann, 1991 .

Gene Prediction by Pattern Recognition and Homology Search

Ying Xu, Edward C. Uberbacher, E. Uberbacher, 1996, ISMB.

Predicting Protein Folding Classes without Overly Relying on Homology

Edward C. Uberbacher, Mark Craven, Richard J. Mural, 1995, ISMB.

Constructing gene models from accurately predicted exons: an application of dynamic programming

Ying Xu, Edward C. Uberbacher, Richard J. Mural, 1994, Comput. Appl. Biosci..

A computational method for assessing peptide-identification reliability in tandem mass spectrometry analysis with SEQUEST

Ying Xu, Edward C. Uberbacher, Dong Xu, 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.

Gene and translation initiation site prediction in metagenomic sequences

Edward C. Uberbacher, Philip F. LoCascio, Doug Hyatt, 2012, Bioinform..

Stepping up the pace of discovery: the genomes to life program

Gary Johnson, Edward C. Uberbacher, Marvin Frazier, 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.

Automated Gene Identification in Large-Scale Genomic Sequences

Edward C. Uberbacher, Ying Xu, E. Uberbacher, 1997, J. Comput. Biol..

The Genome Channel and Genome Annotation Consortium

Edward C. Uberbacher, Richard J. Mural, M. Shah, 1997 .

Computing for the DOE genomes to life program

Gary Johnson, Edward C. Uberbacher, Marvin Frazier, 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.

2D image segmentation using minimum spanning trees

Ying Xu, Edward C. Uberbacher, E. Uberbacher, 1997, Image Vis. Comput..

Optimal reconstruction of a surface using a reference library

Ying Xu, Edward C. Uberbacher, Victor Olman, 1997 .

GRAIL: an integrated artificial intelligence system for gene recognition and interpretation

Edward C. Uberbacher, Richard J. Mural, J. R. Einstein, 1992, Proceedings Eighth Conference on Artificial Intelligence for Applications.

Image exploitation using multisensor/neural network systems

Edward C. Uberbacher, Reinhold C. Mann, Martin Beckerman, 1995, Other Conferences.

Sequence-structure specificity of a knowledge based energy function at the secondary structure level

Edward C. Uberbacher, Dong Xu, Ying Xu, 2000, Bioinform..

MicroRNAs Form Triplexes with Double Stranded DNA at Sequence-Specific Binding Sites; a Eukaryotic Mechanism via which microRNAs Could Directly Alter Gene Expression

Edward C. Uberbacher, Philip F. LoCascio, Mark R. Wilkinson, 2016, PLoS Comput. Biol..

Correcting sequencing errors in DNA coding regions using a dynamic programming approach

Ying Xu, Edward C. Uberbacher, Richard J. Mural, 1995, Comput. Appl. Biosci..

GRAIL: a multi-agent neural network system for gene identification

Edward C. Uberbacher, Ying Xu, Richard J. Mural, 1996, Proc. IEEE.

Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags

Ying Xu, Edward C. Uberbacher, Richard J. Mural, 1997, ISMB.

BESC knowledgebase public portal†

Byung-Hoon Park, Edward C. Uberbacher, Steven D. Brown, 2012, Bioinform..

Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions

Nagiza F. Samatova, Byung-Hoon Park, Edward C. Uberbacher, 2010, Database J. Biol. Databases Curation.

An Efficient Computational Method for Globally Optimal Threading

Ying Xu, Edward C. Uberbacher, Dong Xu, 1998, J. Comput. Biol..

Searching for Consensus Patterns on a Hypercube

Edward C. Uberbacher, Richard J. Mural, R. C. Mann, 1991, The Sixth Distributed Memory Computing Conference, 1991. Proceedings.

A new method for modeling and solving the protein fold recognition problem (extended abstract)

Ying Xu, Edward C. Uberbacher, Dong Xu, 1998, RECOMB '98.

Reference-based gene model prediction on DNA contigs (extended abstract)

Ying Xu, Edward C. Uberbacher, E. Uberbacher, 1997, RECOMB '97.

An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence

Yin Xu, Edward C. Uberbacher, Manesh J. Shah, 1994, ISMB.

Protein structure prediction using hybrid AI methods

Edward C. Uberbacher, Richard J. Mural, X. Guan, 1994, Proceedings of the Tenth Conference on Artificial Intelligence for Applications.

FaceID:a face detection and recognition system

Edward C. Uberbacher, Victor Olman, Nageswara S. V. Rao, 1997, Defense + Security Symposium.

Detection of RNA Polymerase II Promoters and Polyadenylation Sites in Human DNA Sequence

Ying Xu, Xiaojun Guan, Edward C. Uberbacher, 1996, Comput. Chem..

Background rareness-based iterative multiple sequence alignment algorithm for regulatory element detection

Edward C. Uberbacher, Philip F. LoCascio, Chandrasegaran Narasimhan, 2003, Bioinform..

An Iterative Algorithm for Correcting Sequencing Errors in DNA Coding Regions

Edward C. Uberbacher, Richard J. Mural, Ying Xu, 1996, J. Comput. Biol..

A new method for modeling and solving the protein fold recognition problem

Dong Xu, Edward C. Uberbacher, Ying Xu, 1998, RECOMB 1998.

Structure and Function of Microbial Metal-Reduction Proteins

Edward C. Uberbacher, Frank W. Larimer, Ying Xu, 2009 .

Use of neural networks for prediction of graft failure following liver transplantation

Edward C. Uberbacher, Richard J. Mural, Sherri Matis, 1995, Proceedings Eighth IEEE Symposium on Computer-Based Medical Systems.

Data driven computing for Biological Systems

Nagiza F. Samatova, Tjerk P. Straatsma, Edward C. Uberbacher, 2007 .

A segmentation algorithm for noisy images: Design and evaluation

Ying Xu, Edward C. Uberbacher, Victor Olman, 1998, Pattern Recognit. Lett..

Gene identification and analysis: an application of neural network-based information fusion

Ying Xu, Edward C. Uberbacher, Richard J. Mural, 1996 .

A computational method for assessing peptide‐ identification reliability in tandem mass spectrometry analysis with SEQUEST

Ying Xu, Edward C. Uberbacher, Dong Xu, 2004 .

Analyzing large biological datasets with association networks

Edward C. Uberbacher, Tatiana V. Karpinets, E. Uberbacher, 2012, Nucleic acids research.