Brett R. South

发表

Evaluating the state of the art in disorder recognition and normalization of the clinical narrative

David Martínez, Wendy W. Chapman, Sameer Pradhan, 2014, J. Am. Medical Informatics Assoc..

BoB, a best-of-breed automated text de-identification system for VHA clinical documents

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2013, J. Am. Medical Informatics Assoc..

Task 1: ShARe/CLEF eHealth Evaluation Lab 2013

Danielle L. Mowery, Wendy W. Chapman, Sameer Pradhan, 2013, CLEF.

Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease

Shuying Shen, Wendy W. Chapman, Brett R. South, 2009, BMC Bioinformatics.

CASPR: Friendly Annotation Management

Shuying Shen, Brett R. South, Jonathan R. Nebeker, 2012, AMIA.

Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013

Laura-Maria Murtola, Sanna Salanterä, Danielle L. Mowery, 2013, American Medical Informatics Association Annual Symposium.

Automatically Detecting Medications and the Reason for their Prescription in Clinical Narrative Text Documents

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2010, MedInfo.

Annotating ADLs and IADLs in Veterans Affairs Clinical Documents

Mike Conway, Danielle L. Mowery, Wendy W. Chapman, 2015, AMIA.

Using Natural Language Processing on the Free Text of Clinical Documents to Screen for Evidence of Homelessness Among US Veterans

Shuying Shen, Brett R. South, Adi V. Gundlapalli, 2013, AMIA.

Text de-identification for privacy protection: A study of its impact on clinical text information content

Stéphane M. Meystre, Brett R. South, Matthew H. Samore, 2014, J. Biomed. Informatics.

Analysis of False Positive Errors of an Acute Respiratory Infection Text Classifier due to Contextual Features

Shuying Shen, Sylvain Delisle, Wendy W. Chapman, 2010, Summit on translational bioinformatics.

Evaluation and Visualization of Human Annotator Learning Patterns

Shuying Shen, Özlem Uzuner, Brett R. South, 2012, AMIA.

A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts

Stéphane M. Meystre, Danielle L. Mowery, Wendy W. Chapman, 2014, AMIA.

Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora

Wendy W. Chapman, Brett R. South, Lee M. Christensen, 2018, AMIA.

Developing Synthetic VA Healthcare Data in OMOP CDM Model

Brett R. South, Michael E. Matheny, Scott L. DuVall, 2019, AMIA.

RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning

Jay Jarman, Wendy W. Chapman, Brett R. South, 2015, American Medical Informatics Association Annual Symposium.

Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing

Danielle L. Mowery, Wendy W. Chapman, Brett R. South, 2018, AMIA.

Generalizability and Comparison of Automatic Clinical Text De-Identification Methods and Resources

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2012, AMIA.

Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2

Sanna Salanterä, David Martínez, Danielle L. Mowery, 2016, J. Biomed. Semant..

Moonstone: a novel natural language processing system for inferring social risk from clinical narratives

Mike Conway, Danielle L. Mowery, Wendy W. Chapman, 2019, Journal of Biomedical Semantics.

Flipping the Model for Biomedical Informatics Research

Brett R. South, Olga Patterson, Michael E. Matheny, 2018, AMIA.

Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing

Mike Conway, Danielle L. Mowery, Wendy W. Chapman, 2017, Summit on Clinical Research Informatics.

Natural Language Processing for Biosurveillance

Wendy W. Chapman, Brett R. South, Adi V. Gundlapalli, 2006, Handbook of Biosurveillance.

2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text

Shuying Shen, Özlem Uzuner, Brett R. South, 2011, J. Am. Medical Informatics Assoc..

Evaluating the state of the art in coreference resolution for electronic medical records

Shuying Shen, Özlem Uzuner, Brett R. South, 2012, J. Am. Medical Informatics Assoc..

Inductive Creation of an Annotation Schema and a Reference Standard for De-identification of VA Electronic Clinical Notes

Jeanmarie Mayer, Shuying Shen, Stéphane M. Meystre, 2009, AMIA.

A Hybrid Stepwise Approach for De-identifying Person Names in Clinical Documents

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2012, BioNLP@HLT-NAACL.

The Informatics Sculptor & the Clinical Annotator: Effective Annotation Strategies

Brett R. South, Glenn T. Gobbel, Ruth M. Reeves, 2015, AMIA.

Textractor: a hybrid system for medications and reason for their prescription extraction from clinical text documents

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2010, J. Am. Medical Informatics Assoc..

A Survey of VHA Privacy Officers for the External Use of Automatically De-Identified Clinical Documents

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2012, AMIA.

Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis

Mike Conway, Danielle L. Mowery, Wendy W. Chapman, 2016, Journal of Biomedical Semantics.

The Department of Defense (DoD) and Department of Veterans Affairs (VA) Infrastructure for Clinical Intelligence (DaVINCI)

Brett R. South, Michael E. Matheny, Jonathan R. Nebeker, 2018, AMIA.

The Relationship Between Structural Characteristics of Electronic Clinical Texts and Ratings of Document Quality

Shuying Shen, Charlene R. Weir, Brett R. South, 2012, AMIA.

On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts

Shuying Shen, Annie Chen, Liqin Wang, 2012, AMIA.

Classifying Supporting, Refuting, or Uncertain Evidence for Pneumonia Case Review

Brett R. South, Melissa Tharp, Barbara Jones, 2015, Online Journal of Public Health Informatics.

Enhancing Annotation of Clinical Text using Pre-Annotation of Common PHI

Shuying Shen, Stéphane M. Meystre, Brett R. South, 2010 .

Overview of the ShARe/CLEF eHealth Evaluation Lab 2013

Sanna Salanterä, Gareth J. F. Jones, Guido Zuccon, 2013, CLEF.

Automated Extraction of Disease Activity Component Measures From Electronic Medical Records Using Natural Language Processing

Brett R. South, Brian C. Sauer, Jianwei Leng, 2016, AMIA.

What a Catch! Traits that Define Good Annotators

Shuying Shen, Brett R. South, Tyler Forbush, 2013, MedInfo.

Creating Reusable Annotated Corpora with the Clinical Document Architecture

Brett R. South, Adi V. Gundlapalli, Matthew H. Samore, 2011, 2011 44th Hawaii International Conference on System Sciences.

Investigating the Documentation of Electronic Cigarette Use in the Veteran Affairs Electronic Health Record: A Pilot Study

Mike Conway, Danielle L. Mowery, Brett R. South, 2017, BioNLP.

Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text

Stéphane M. Meystre, Danielle L. Mowery, Wendy W. Chapman, 2014, J. Biomed. Informatics.

Extracting Concepts Related to a Homelessness from the Free Text of VA Electronic Medical Records

Shuying Shen, Brett R. South, Adi V. Gundlapalli, 2014, AMIA.

Automated extraction of ejection fraction for quality measurement using regular expressions in Unstructured Information Management Architecture (UIMA) for heart failure

Shuying Shen, Charlene R. Weir, Bruce E. Bray, 2012, J. Am. Medical Informatics Assoc..

A Prototype Tool Set to Support Machine-Assisted Annotation

Shuying Shen, Wendy W. Chapman, Brett R. South, 2012, BioNLP@HLT-NAACL.

Task 2 : ShARe/CLEF eHealth Evaluation Lab 2014

Danielle L. Mowery, Wendy W. Chapman, Noémie Elhadad, 2013 .

Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter?

Shuying Shen, Sylvain Delisle, Wendy W. Chapman, 2008, AMIA.

Differences in information accessed in a pharmacologic knowledge base using a conversational agent vs traditional search methods

Brett R. South, Gretchen P. Jackson, Bedda L. Rosario, 2021, Int. J. Medical Informatics.

“Sitting on Pins and Needles”: Characterization of Symptom Descriptions in Clinical Notes”

Shuying Shen, Brett R. South, Adi V. Gundlapalli, 2013, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Application of Natural Language Processing to VA Electronic Health Records to Identify Phenotypic Characteristics for Clinical and Research Purposes

Shuying Shen, Shobha Phansalkar, Brett R. South, 2008, Summit on translational bioinformatics.

Using NLP on VA Electronic Medical Records to Facilitate Epidemiologic Case Investigations

Shuying Shen, Shobha Phansalkar, Wendy W. Chapman, 2008 .