Daniel C. Liebler

发表

Bioinformatics Applications Note Gene Expression Skyline: an Open Source Document Editor for Creating and Analyzing Targeted Proteomics Experiments

Brendan MacLean, Daniela M. Tomazela, Nicholas Shulman, 2022 .

Protein Identification by Peptide Mass Fingerprinting

Daniel C. Liebler, 2002 .

Corrigendum: Proteomic analysis of colon and rectal carcinoma using standard and customized databases

Xiaojing Wang, David L. Tabb, Daniel C. Liebler, 2015, Scientific Data.

Bioinformatic challenges for proteomic biomarkers of cancer

David L. Tabb, Daniel C. Liebler, 2011, BMC Bioinformatics.

Mass Spectrometers for Protein and Peptide Analysis

Daniel C. Liebler, 2002 .

Bioinformatics Tools for Proteomics

Daniel C. Liebler, 2006 .

SALSA: An Algorithm for Mining Specific Features of Tandem MS Data

Daniel C. Liebler, 2002 .

Enabling proteomics-based identification of human cancer variations

Jing Li, David L. Tabb, Daniel C. Liebler, 2010, BMC Bioinformatics.

Supporting tool suite for production proteomics

Matthew Chambers, David L. Tabb, Daniel C. Liebler, 2011, Bioinform..

Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates

Kan Chen, Dong Wang, Matthew Chambers, 2013, Genom. Proteom. Bioinform..

Erratum: Comparative shotgun proteomics using spectral count data and quasi-likelihood modeling (Journal of Proteome Research (2010) 9 (4295-4305))

Ming Li, Haixia Zhang, Daniel C. Liebler, 2010 .

Protein Identification with Tandem Mass Spectrometry Data

Daniel C. Liebler, 2002 .

New Directions in Proteomics

Daniel C. Liebler, 2002 .

Co-expression network analysis identifies Spleen Tyrosine Kinase (SYK) as a candidate oncogenic driver in a subset of small-cell lung cancer

Jonathan E. Clark, Shyr Yu, Daniel C. Liebler, 2013, BMC Systems Biology.

Proteomic analysis of colon and rectal carcinoma using standard and customized databases

David L. Tabb, Daniel C. Liebler, Robbert J.C. Slebos, 2015, Scientific Data.

Label-Free Quantitation of Protein Modifications by Pseudo Selected Reaction Monitoring with Internal Reference Peptides

Brendan MacLean, Daniel C. Liebler, Michael J. MacCoss, 2012, Journal of proteome research.

proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data*

David L. Tabb, Daniel C. Liebler, Xiaojing Wang, 2015, Molecular & Cellular Proteomics.

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

Subha Madhavan, Peter B. McGarvey, Li Ding, 2019, Cell.

Proteome Profiling Outperforms Transcriptome Profiling for Coexpression Based Gene Function Prediction*

Daniel C. Liebler, Bing Zhang, Amanda G. Paulovich, 2016, Molecular & Cellular Proteomics.

Elucidating mechanisms of drug-induced toxicity

Daniel C. Liebler, D. Liebler, F. Guengerich, 2005, Nature Reviews Drug Discovery.

The development of selected reaction monitoring methods for targeted proteomics via empirical refinement

Brendan MacLean, Daniela M. Tomazela, Daniel C. Liebler, 2012, Proteomics.

Alkylation Damage by Lipid Electrophiles Targets Functional Protein Systems*

Daniel C. Liebler, Bing Zhang, Lawrence J. Marnett, 2014, Molecular & Cellular Proteomics.

Phenotype-Driven Plasma Biobanking Strategies and Methods

Nancy J. Brown, Daniel C. Liebler, Erica A. Bowton, 2015, Journal of personalized medicine.

Performance Metrics for Liquid Chromatography-Tandem Mass Spectrometry Systems in Proteomics Analyses*

David L. Tabb, Daniel C. Liebler, Stephen E. Stein, 2009, Molecular & Cellular Proteomics.

Proteomics in cancer research

Daniel C. Liebler, 2004 .

Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage Specificity*

Daniel C. Liebler, Xiaojing Wang, Matthew C. Chambers, 2017, Molecular & Cellular Proteomics.

Diagnostic Accuracy of MALDI Mass Spectrometric Analysis of Unfractionated Serum in Lung Cancer

William L. Bigbee, Daniel C. Liebler, Yu Shyr, 2007, Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer.

Comparative Shotgun Proteomics Using Spectral Count Data and Quasi-Likelihood Modeling

Daniel C. Liebler, Yu Shyr, Dean Billheimer, 2010, Journal of proteome research.

Colorectal Cancer Cell Line Proteomes Are Representative of Primary Tumors and Predict Drug Sensitivity.

Daniel C. Liebler, Xiaojing Wang, Bing Zhang, 2017, Gastroenterology.

Tumor cell-adipocyte gap junctions activate lipolysis and are essential for breast tumorigenesis

Atul J. Butte, Daniel C. Liebler, Serghei Malkov, 2018 .

Comparison of Protein Immunoprecipitation-Multiple Reaction Monitoring with ELISA for Assay of Biomarker Candidates in Plasma

Daniel C. Liebler, Robbert J. C. Slebos, R. Slebos, 2013, Journal of proteome research.

Equivalence of Protein Inventories Obtained from Formalin-fixed Paraffin-embedded and Frozen Tissue in Multidimensional Liquid Chromatography-Tandem Mass Spectrometry Shotgun Proteomic Analysis*

Daniel C. Liebler, Robbert J. C. Slebos, Ming Li, 2009, Molecular & Cellular Proteomics.

Global Stability of Plasma Proteomes for Mass Spectrometry-Based Analyses*

Daniel C. Liebler, Lisa J. Zimmerman, Robbert J. C. Slebos, 2012, Molecular & Cellular Proteomics.

Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

David L. Tabb, Daniel C. Liebler, Bing Zhang, 2015, Journal of proteome research.

An Analysis of the Sensitivity of Proteogenomic Mapping of Somatic Mutations and Novel Splicing Events in Cancer*

Li Ding, David L. Tabb, Daniel C. Liebler, 2015, Molecular & Cellular Proteomics.

Site-specific mapping and quantification of protein S-sulfenylation in cells

Daniel C. Liebler, Jing Yang, Kate S. Carroll, 2014, Nature Communications.

Introduction to Proteomics

Daniel C. Liebler, D. Liebler, 2002, Humana Press.