C. T. Saunders

发表

Direct haplotype-resolved 5-base HiFi sequencing for genome-wide profiling of hypermethylation outliers in a rare disease cohort

Warren A. Cheung, W. Rowell, Byunggil Yoo, 2023, Nature communications.

Manta: rapid detection of structural variants and indels for germline and cancer sequencing applications

Xiaoyu Chen, Ole Schulz-Trieglaff, Anthony J. Cox, 2016, Bioinform..

Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms

Semyon Kruglyak, Stephen W. Tanner, Elliott H. Margulies, 2013, Bioinform..

Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs

Wendy S. W. Wong, Christopher T. Saunders, Sajani Swamy, 2012, Bioinform..

Evaluation of structural and evolutionary contributions to deleterious mutation prediction.

Christopher T. Saunders, D. Baker, C. T. Saunders, 2002, Journal of molecular biology.

Strelka2: fast and accurate calling of germline and somatic variants

Christopher T. Saunders, A. Halpern, P. Krusche, 2018, Nature Methods.

Strelka2: fast and accurate calling of germline and somatic variants

A. Halpern, P. Krusche, Morten Källberg, 2018, Nature Methods.

Insights from modeling protein evolution with context-dependent mutation and asymmetric amino acid selection.

Phil Green, Christopher T. Saunders, P. Green, 2007, Molecular biology and evolution.

Strelka2: Fast and accurate variant calling for clinical sequencing applications

Konrad Scheffler, Peter Krusche, Doruk Beyter, 2017, bioRxiv.

Manta: Rapid detection of structural variants and indels for clinical sequencing applications

Ole Schulz-Trieglaff, Anthony J. Cox, Semyon Kruglyak, 2015, bioRxiv.

REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

Phillip A. Richmond, M. Eberle, H. Rehm, 2021, Genome Medicine.

HiPhase: Jointly phasing small and structural variants from HiFi sequencing

W. Rowell, Z. Kronenberg, A. Wenger, 2023, bioRxiv.