Bojan Zagrovic

发表

Solvent viscosity dependence of the folding rate of a small protein: Distributed computing study

Bojan Zagrovic, Vijay Pande, V. Pande, 2003, J. Comput. Chem..

PARENT: A Parallel Software Suite for the Calculation of Configurational Entropy in Biomolecular Systems.

Bojan Zagrovic, Markus Fleck, Anton A Polyansky, 2016, Journal of chemical theory and computation.

Fuento: functional enrichment for bioinformatics

Bojan Zagrovic, David Weichselbaum, Anton A. Polyansky, 2017, Bioinform..

A Systematic Framework for Molecular Dynamics Simulations of Protein Post-Translational Modifications

Chris Oostenbrink, Drazen Petrov, Bojan Zagrovic, 2013, PLoS Comput. Biol..

Are Current Atomistic Force Fields Accurate Enough to Study Proteins in Crowded Environments?

Drazen Petrov, Bojan Zagrovic, D. Petrov, 2014, PLoS Comput. Biol..

Intrinsically Disordered Regions May Lower the Hydration Free Energy in Proteins: A Case Study of Nudix Hydrolase in the Bacterium Deinococcus radiodurans

Ivo F. Sbalzarini, Omar Awile, Bojan Zagrovic, 2010, PLoS Comput. Biol..

Erratum: Random-coil behavior and the dimensions of chemically unfolded proteins (Proceedings of The National Academy of Sciences of The United States of America (August 24, 2004) 101, 34 (12491-12496))

Vijay S. Pande, Ingo Ruczinski, Kevin W. Plaxco, 2005 .

mRNA/protein sequence complementarity and its determinants: The impact of affinity scales

Bojan Zagrovic, Lukas Bartonek, Lukas Bartonek, 2017, PLoS Comput. Biol..

Vienna-PTM web server: a toolkit for MD simulations of protein post-translational modifications

Drazen Petrov, Bojan Zagrovic, Christian Margreitter, 2013, Nucleic Acids Res..

Atomistic protein folding simulations on the hundreds of microsecond timescale using worldwide distributed computing

Vijay S. Pande, Michael R. Shirts, Jarrod Chapman, 2002 .

Protein Electrostatic Properties Predefining the Level of Surface Hydrophobicity Change upon Phosphorylation

Bojan Zagrovic, Anton A. Polyansky, A. Polyansky, 2012, The journal of physical chemistry letters.

Folding probabilities: a novel approach to folding transitions and the two-dimensional Ising-model.

Vijay S Pande, Bojan Zagrovic, Jessica Shapiro, 2004, The Journal of chemical physics.

Computational Analysis of the Mechanism and Thermodynamics of Inhibition of Phosphodiesterase 5A by Synthetic Ligands.

Wilfred F van Gunsteren, Bojan Zagrovic, 2007, Journal of chemical theory and computation.

Dynamics May Significantly Influence the Estimation of Interatomic Distances in Biomolecular X-ray Structures

Bojan Zagrovic, Navraj S. Pannu, Wilfred F. van Gunsteren, 2011, Journal of molecular biology.

Computational study of the mechanism and the relative free energies of binding of anticholesteremic inhibitors to squalene-hopene cyclase.

Wilfred F van Gunsteren, Bojan Zagrovic, Fabienne Schwab, 2008, Biochemistry.

X-ray refinement significantly underestimates the level of microscopic heterogeneity in biomolecular crystals

Bojan Zagrovic, Navraj S. Pannu, B. Zagrovic, 2014, Nature Communications.

Structure and dynamics of two β-peptides in solution from molecular dynamics simulations validated against experiment

Matthias Huber, Bojan Zagrovic, Wilfred F. van Gunsteren, 2008, European Biophysics Journal.