Tanya Z. Berardini

发表

Sustainable funding for biocuration: The Arabidopsis Information Resource (TAIR) as a case study of a subscription-based funding model

Qian Li, Leonore Reiser, Tanya Z. Berardini, 2016, Database J. Biol. Databases Curation.

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

Stephen P. Ficklin, Nic Herndon, Leonore Reiser, 2018, Database J. Biol. Databases Curation.

Building an efficient curation workflow for the Arabidopsis literature corpus

Tanya Z. Berardini, Donghui Li, Robert J. Muller, 2012, Database J. Biol. Databases Curation.

Preliminary Study on the Impact of Literature Curation in a Model Organism Database on Article Citation Rates

Leonore Reiser, Tanya Z. Berardini, Ron Daniel, 2016, D Lib Mag..

The Gene Ontology: enhancements for 2011

María Martín, Juancarlos Chan, Paul W. Sternberg, 2011, Nucleic Acids Res..

PatMatch: a program for finding patterns in peptide and nucleotide sequences

Tanya Z. Berardini, Shuai Weng, J. Michael Cherry, 2005, Nucleic Acids Res..

The Arabidopsis Information Resource (TAIR): gene structure and function annotation

Tanya Z. Berardini, Donghui Li, Robert J. Muller, 2007, Nucleic Acids Res..

'Computable' Phenotypes Enable Comparative and Predictive Phenomics Among Plant Species and Across Domains of Life

Toni Kazic, Tanya Z. Berardini, Eva Huala, 2018, Application of Semantic Technology in Biodiversity Science.

The Gene Ontology's Reference Genome Project: A Unified Framework for Functional Annotation across Species

Li Ni, Kimberly Van Auken, Kara Dolinski, 2009, PLoS Comput. Biol..

Biocurators and Biocuration: surveying the 21st century challenges

Claire O'Donovan, Terri K. Attwood, Ioannis Xenarios, 2012, Database J. Biol. Databases Curation.

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

Tanya Z. Berardini, Donghui Li, Robert J. Muller, 2011, Nucleic Acids Res..

Annotation of gene product function from high-throughput studies using the Gene Ontology

Rebecca Tauber, Rachael P. Huntley, Tony Sawford, 2019, Database J. Biol. Databases Curation.

Assessment of community-submitted ontology annotations from a novel database-journal partnership

Tanya Z. Berardini, Donghui Li, Robert J. Muller, 2012, Database J. Biol. Databases Curation.

The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

Tanya Z. Berardini, Chris Mungall, Maryann E. Martone, 2013, J. Biomed. Semant..

Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR

Kimberly Van Auken, Juancarlos Chan, Hans-Michael Müller, 2012, Database J. Biol. Databases Curation.

TermGenie – a web-application for pattern-based ontology class generation

Tanya Z. Berardini, Chris Mungall, David Osumi-Sutherland, 2014, J. Biomed. Semant..

The Gene Ontology project in 2008

Giorgio Valle, Kimberly Van Auken, Paul W. Sternberg, 2007, Nucleic Acids Res..

Cross-product extensions of the Gene Ontology

Tanya Z. Berardini, Midori A. Harris, David P. Hill, 2009, Journal of Biomedical Informatics.

Modeling biochemical pathways in the gene ontology

Judith A. Blake, Tanya Z. Berardini, Chris Mungall, 2016, Database J. Biol. Databases Curation.

Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology

Perry M. Elliott, Rachael P. Huntley, Judith A. Blake, 2018, Circulation. Genomic and precision medicine.

The Gene Ontology in 2010: extensions and refinements

Giorgio Valle, Juancarlos Chan, Paul W. Sternberg, 2009, Nucleic Acids Res..

Cross-product extensions of the Gene Ontology

Tanya Z. Berardini, Chris Mungall, Midori A. Harris, 2009, J. Biomed. Informatics.

Accelerating literature curation with text-mining tools: a case study of using PubTator to curate genes in PubMed abstracts

Zhiyong Lu, Tanya Z. Berardini, Donghui Li, 2012, Database J. Biol. Databases Curation.

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community

Jungwon Yoon, Gabriel Lander, Leonore Reiser, 2003, Nucleic Acids Res..

Regulation of Vegetative Phase Change in Arabidopsis thaliana by Cyclophilin 40

Tanya Z. Berardini, T. Berardini, Hui Sun, 2001, Science.