Mudra Choudhury

发表

Identifying Cell Type-Specific Transcription Factors by Integrating ChIP-seq and eQTL Data–Application to Monocyte Gene Regulation

S. Ramsey, Mudra Choudhury, 2016, Gene regulation and systems biology.

Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in inbred and recombinant inbred mice

E. Eskin, X. Xiao, J. Jentsch, 2022, bioRxiv.

L-GIREMI uncovers RNA editing sites in long-read RNA-seq

A. Mortazavi, X. Xiao, Ting Fu, 2022, bioRxiv.

LINE-associated cryptic splicing induces dsRNA-mediated interferon response and tumor immunity

Howard Y. Chang, S. E. Harvey, Ryan A. Flynn, 2023, bioRxiv.

The Development and Application of a Systems Biology Approach to Mapping Monocyte Gene Regulatory Networks

Mudra Choudhury, 2016 .

Widespread RNA hypoediting in schizophrenia and its relevance to mitochondrial function

X. Xiao, J. Bahn, Ting Fu, 2023, Science advances.

Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in a panel of inbred and recombinant inbred mice

E. Eskin, X. Xiao, J. Jentsch, 2023, Cell reports.

dsRID: Editing-free in silico identification of dsRNA region using long-read RNA-seq data

X. Xiao, Zhiheng Liu, Mudra Choudhury, 2023, bioRxiv.

hnRNPM protects against the dsRNA-mediated interferon response by repressing LINE-associated cryptic splicing.

S. E. Harvey, Eric L. Van Nostrand, Giovanni Quinones-Valdez, 2024, Molecular cell.