Zi Liu

Benchmark data for identifying DNA methylation sites via pseudo trinucleotide composition

Kuo-Chen Chou, Xuan Xiao, Wang-Ren Qiu, 2015, Data in brief.

iPPBS-Opt: A Sequence-Based Ensemble Classifier for Identifying Protein-Protein Binding Sites by Optimizing Imbalanced Training Datasets

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2016, Molecules.

Using multi-label algorithm to predict the post-translation modification types of proteins

Xuan Xiao, Wang-Ren Qiu, Zi Liu, 2014, 2014 4th IEEE International Conference on Information Science and Technology.

Identification of protein-protein binding sites by incorporating the physicochemical properties and stationary wavelet transforms into pseudo amino acid composition

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2016, Journal of biomolecular structure & dynamics.

iSuc-PseOpt: Identifying lysine succinylation sites in proteins by incorporating sequence-coupling effects into pseudo components and optimizing imbalanced training dataset.

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2016, Analytical biochemistry.

pSuc-Lys: Predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach.

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2016, Journal of theoretical biology.

iPPI-Esml: An ensemble classifier for identifying the interactions of proteins by incorporating their physicochemical properties and wavelet transforms into PseAAC.

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2015, Journal of theoretical biology.

iCataly-PseAAC: Identification of Enzymes Catalytic Sites Using Sequence Evolution Information with Grey Model GM (2,1)

Xuan Xiao, Wang-Ren Qiu, Zi Liu, 2015, The Journal of Membrane Biology.

iROS-gPseKNC: Predicting replication origin sites in DNA by incorporating dinucleotide position-specific propensity into general pseudo nucleotide composition

Kuo-Chen Chou, Xuan Xiao, Zi Liu, 2016, Oncotarget.