Yuichi Inadomi

发表

Parallel Programming with Message Passing Library and Its Precision of Calculation

Yuichi Inadomi, Umpei Nagashima, Katsuhiro Tamura, 2002 .

Open-architecture Implementation of Fragment Molecular Orbital Method for Peta-scale Computing pdf

Yuichi Inadomi, Hiroaki Honda, Taizo Kobayashi, 2007, ArXiv.

Development of RDMA-based Communication Middleware Library for Molecular Orbital Program

Yuichi Inadomi, Hiroaki Honda, Toshiya Takami, 2015 .

Performance Analysis of CPU and DRAM Power Constrained Systems with Magnetohydrodynamic Simulation Code

Yuichi Inadomi, Koji Inoue, Takayuki Umeda, 2018, 2018 IEEE 20th International Conference on High Performance Computing and Communications; IEEE 16th International Conference on Smart City; IEEE 4th International Conference on Data Science and Systems (HPCC/SmartCity/DSS).

Performance Tuning of Parallel Fragment Molecular OrbitalProgram (OpenFMO) for Effective Execution on K-computer

Yuichi Inadomi, Hiroaki Honda, Taizo Kobayashi, 2013 .

Implementation and Evaluation of Fock Matrix Calculation Program on the Cell Processor

Tetsuo Hayashi, Yuichi Inadomi, 本田宏明, 2007 .

Performance prediction of large-scale parallell system and application using macro-level simulation

Yuichi Inadomi, Kazuaki Murakami, Koji Inoue, 2008, HiPC 2008.

Performance prediction of large-scale parallell system and application using macro-level simulation

Yuichi Inadomi, Kazuaki Murakami, Koji Inoue, 2008, 2008 SC - International Conference for High Performance Computing, Networking, Storage and Analysis.

CHAPTER 12 – Drug discovery using grid technology

Yuichi Inadomi, Umpei Nagashima, Tatsuya Nakano, 2006 .

Power Consumption Evaluation of an MHD Simulation with CPU Power Capping

Yuichi Inadomi, Koji Inoue, Mutsumi Aoyagi, 2014, 2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing.

Implementation of Parallel Fragment Molecular Orbital Calculation Program Using One-Sided Communication Functionality

Yuichi Inadomi, Koji Inoue, Ryutaro Susukita, 2007 .

PSI-NSIM: A Parallel Interconnection Network Simulator for Performance Analysis of Large-scale Parallel Systems

Yuichi Inadomi, Ryutaro Susukita, Hiroaki Honda, 2007 .

A Master-Worker Type Eigensolver for Molecular Orbital Computations

Tetsuya Sakurai, Yoshihisa Kodaki, Hiroto Tadano, 2006, PARA.

Increased Efficiency of Parallel Calculations of Fragment Molecular Orbitals by Using Fine-Grained Parallelization on a HITACHI SR8000 Supercomputer

Yuichi Inadomi, Umpei Nagashima, Tatsuya Nakano, 2001, HPCN Europe.

Multi-physics Extension of OpenFMO Framework pdf

Yuichi Inadomi, Koji Inoue, Ryutaro Susukita, 2007, ArXiv.

NSIM: An Interconnection Network Simulator for Extreme-Scale Parallel Computers

Yuichi Inadomi, Kazuaki Murakami, Koji Inoue, 2011, IEICE Trans. Inf. Syst..

Parallel Fock matrix construction with distributed shared memory model for the FMO‐MO method

Tetsuya Sakurai, Hiroto Tadano, Yuichi Inadomi, 2010, J. Comput. Chem..

Full Electron Calculation Beyond 20,000 Atoms: Ground Electronic State of Photosynthetic Proteins

Yuichi Inadomi, Hiroaki Umeda, Satoshi Sekiguchi, 2005, ACM/IEEE SC 2005 Conference (SC'05).

Parallel Fock matrix construction program for molecular orbital calculation—Specific computer with a hierarchical network

Yuichi Inadomi, Hiroaki Umeda, Umpei Nagashima, 2009, J. Comput. Chem..

Parallel Fock Matrix Construction Algorithm for Molecular Orbital Calculation Specific Computer

Yuichi Inadomi, Hiroaki Umeda, Umpei Nagashima, 2005 .

Evaluating the impacts of code-level performance tunings on power efficiency

Yuichi Inadomi, Koji Ueno, Toshio Endo, 2016, 2016 IEEE International Conference on Big Data (Big Data).

PSI-SIM: A System Performance Evaluation Environment Toward Next Generation Supercomputer Development

Yuichi Inadomi, Koji Inoue, Ryutaro Susukita, 2007 .

Improvement, Parallelization and Performance Evaluation of Routines for Electron Repulsion Integrals in Fragment Molecular Orbital Method Program ABINIT-MP

Yuichi Inadomi, Umpei Nagashima, Tatsuya Nakano, 2001 .

Development of Special Purpose Processor for Molecular Orbital Calculations

Yuichi Inadomi, Hiroaki Honda, 本田宏明, 2003 .

大規模システム評価環境PSI-SIM : 数千個のマルチコア・プロセッサを搭載したペタスケールコンピュータの性能予測

Yuichi Inadomi, Ryutaro Susukita, 本田宏明, 2008 .

A Hybrid Parallel Method for Large Sparse Eigenvalue Problems on a Grid Computing Environment Using Ninf-G/MPI

Tetsuya Sakurai, Yoshihisa Kodaki, Yuichi Inadomi, 2005, LSSC.

PSI-SIM : System Performance Evaluation Environment for Next-Generation Supercomputers

Yuichi Inadomi, Koji Inoue, Ryutaro Susukita, 2007 .

Fragment molecular orbital study of the electronic excitations in the photosynthetic reaction center of Blastochloris viridis

Yuichi Inadomi, Hiroaki Umeda, Satoshi Sekiguchi, 2009, J. Comput. Chem..

Analyzing and mitigating the impact of manufacturing variability in power-constrained supercomputing

Yuichi Inadomi, Martin Schulz, Koji Inoue, 2015, SC15: International Conference for High Performance Computing, Networking, Storage and Analysis.

RPC/MPI Hybrid Implementation of OpenFMO - All Electron Calculations of a Ribosome

Yuichi Inadomi, Taizo Kobayashi, Toshiya Takami, 2009, PARCO.

A Moment‐Based Method for Large‐Scale Generalized Eigenvalue Problems

Tetsuya Sakurai, Hiroto Tadano, Yuichi Inadomi, 2004 .

Eric: A Special-Purpose Processor for ERI Calculations in Quantum Chemistry Applications

Yuichi Inadomi, Kazuaki Murakami, 本田宏明, 2002 .

Fragment molecular orbital method: application to molecular dynamics simulation, ‘ab initio FMO-MD’

Yuichi Inadomi, Yutaka Ueno, Yuto Komeiji, 2003 .

Fragment Molecular Orbital (FMO) and FMO-MO Calculations of DNA: Accuracy Validation of Energy and Interfragment Interaction Energy

Yuichi Inadomi, Hiroaki Umeda, Umpei Nagashima, 2009 .

PEACH 4 with ABINIT-MP: a general platform for classical and quantum simulations of biological molecules.

Yuichi Inadomi, Yuto Komeiji, Tatsuya Nakano, 2004, Computational biology and chemistry.

Fragmentation Position Dependency of the Total Energy and Atomic Charge Difference between the Fragment MO Method and Conventional Ab Initio SCF-MO Method. A Case of (−)-Epicatechin Gallate with STO-3G Basis Set

Yuichi Inadomi, Umpei Nagashima, Katsuhiro Tamura, 2007 .

DNA and estrogen receptor interaction revealed by fragment molecular orbital calculations.

Yuichi Inadomi, Lennart Nilsson, Umpei Nagashima, 2007, The journal of physical chemistry. B.

FMO-MO Method as an Initial Guess Generation for SCF Calculation: Case of (-)-Epicatechin Gallate

Yuichi Inadomi, Hiroaki Umeda, Umpei Nagashima, 2008 .