Shimon Weiss

发表

Single-molecule FRET experiments with a red-enhanced custom technology SPAD

Francesco Panzeri, Antonino Ingargiola, Ron R Lin, 2013, Photonics West - Biomedical Optics.

Photon-HDF5: an open file format for single-molecule fluorescence experiments using photon-counting detectors

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2015, bioRxiv.

Photorefractive Dynamic Optical Interconnects

Shimon Weiss, Shmuel Sternklar, Mordechai Segev, 1989, Other Conferences.

Next-generation 3-D detector improves single-molecule imaging

John V. Vallerga, Shimon Weiss, Xavier Michalet, 2007 .

Gamma-ray astronomy using a high pressure gas scintillation drift chamber with a waveshifting fiber readout

Shimon Weiss, Bernard Sadoulet, Ann M. Parsons, 1992, Optics & Photonics.

Development of an ultrafast single photon counting imager for single molecule imaging

Shimon Weiss, Xavier Michalet, Katsushi Arisaka, 2006, SPIE BiOS.

Open Computational Tools for Freely Diffusing Single-Molecule Fluorescence Analysis

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016 .

Development of a high throughput single-particle screening for inorganic semiconductor nanorods as neural voltage sensor

Antonino Ingargiola, Shimon Weiss, Yung Kuo, 2017, NanoScience + Engineering.

Image Bearing Photorefractive Oscillators

Shimon Weiss, Shmuel Sternklar, Mordechai Segev, 1987, Other Conferences.

Photon-HDF5: An Open File Format for Timestamp-Based Single-Molecule Fluorescence Experiments.

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016, Biophysical journal.

Photon-HDF5: An Open File Format for Timestamp-Based Single-Molecule Fluorescence Data

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016 .

Cusp-artifacts in high order Superresolution optical fluctuation imaging

Shimon Weiss, Xiyu Yi, S. Weiss, 2019, bioRxiv.

Near-infrared peptide-coated quantum dots for small animal imaging

Shimon Weiss, Xavier Michalet, Laurent A Bentolila, 2006, SPIE BiOS.

FRETBursts: Open Source Burst Analysis Toolkit for Confocal Single-Molecule FRET

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016 .

16-Ch time-resolved single-molecule spectroscopy using line excitation

Antonino Ingargiola, Angelo Gulinatti, Ivan Rech, 2017, BiOS.

Enhancing the photoluminescence of peptide-coated nanocrystals

James M. Tsay, Shimon Weiss, Soeren Doose, 2005, SPIE BiOS.

Progress on the Scintillation Imaging Gas-filled Hard X-ray Telescope (SIGHT)

Shimon Weiss, Bernard Sadoulet, Ann M. Parsons, 1994, Optics & Photonics.

A time-gated large-array SPAD camera for picosecond resolution real-time FLIM (Conference Presentation)

Edoardo Charbon, Shimon Weiss, Xavier Michalet, 2018 .

FRETBursts: An Open Source Toolkit for Analysis of Freely-Diffusing Single-Molecule FRET

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016, bioRxiv.

Phasor-based widefield FLIM using a gated 512×512 single-photon SPAD imager

Edoardo Charbon, Shimon Weiss, Xavier Michalet, 2019, BiOS.

Photon-HDF5: open data format and computational tools for timestamp-based single-molecule experiments

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2016, SPIE BiOS.

A 512 × 512 SPAD Image Sensor with Built-In Gating for Phasor Based Real-Time siFLIM

Edoardo Charbon, Shimon Weiss, Xavier Michalet, 2017 .

Biochemical and Physiological Characterization: Development & Apply Optical Methods for Charaterizing Biochemical Protein-Protein Interactions in MR-1

Shimon Weiss, 2006 .

8-spot smFRET analysis using two 8-pixel SPAD arrays

Francesco Panzeri, Antonino Ingargiola, Niusha Sarkhosh, 2013, Photonics West - Biomedical Optics.

3D super-resolution imaging using a generalized and scalable progressive refinement method on sparse recovery (PRIS)

Shimon Weiss, Rafael Piestun, Xiyu Yi, 2019, bioRxiv.

Single Molecule Quantum-Confined Stark Effect Measurements of Semiconductor Nanoparticles at Room Temperature

Shimon Weiss, Dan Oron, Kyoungwon Park, 2012, Photonics West - Biomedical Optics.

A Multispot Confocal Platform for High-Throughput Freely Diffusing Single-Molecule FRET Studies

Antonino Ingargiola, Angelo Gulinatti, Ivan Rech, 2016 .

A novel fluorescence microscopy image deconvolution approach

Shimon Weiss, Jing Qin, Xiyu Yi, 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).

Advances in superresolution optical fluctuation imaging (SOFI)

Shimon Weiss, Sonny Ly, Thomas Dertinger, 2012, Quarterly Reviews of Biophysics.

Ultra high-throughput single molecule spectroscopy with a 1024 pixel SPAD

Franco Zappa, Sergio Cova, Shimon Weiss, 2011, BiOS.

Ultrafast scanning probe microscopy

Shimon Weiss, Miguel Salmeron, D. F. Ogletree, 1994, Photonics West - Lasers and Applications in Science and Engineering.

High-throughput single-molecule optofluidic analysis

Ron R Lin, Shimon Weiss, Aaron M. Streets, 2011, Nature Methods.

Opening and Closing of the Bacterial RNA Polymerase Clamp

Shimon Weiss, Jennifer L. Knight, Rolf Jansen, 2012, Science.

Aromatic aldehyde and hydrazine activated peptide coated quantum dots for easy bioconjugation and live cell imaging.

Shimon Weiss, Maxime Dahan, Fabien Pinaud, 2011, Bioconjugate chemistry.

Photobleaching pathways in single-molecule FRET experiments.

Shimon Weiss, Kambiz M. Hamadani, Eyal Nir, 2007, Journal of the American Chemical Society.

Ratiometric measurement and identification of single diffusing molecules

Shimon Weiss, Peter G. Schultz, Maxime Dahan, 1999 .

Carrier transport effects and dynamics in multiple quantum well optical amplifiers

Shimon Weiss, Jay M. Wiesenfeld, Daniel S. Chemla, 1994 .

Stable, compact, bright biofunctional quantum dots with improved peptide coating.

Shimon Weiss, S. Weiss, J. Li, 2012, The journal of physical chemistry. B.

Wavefunction engineering: From quantum wells to near-infrared type-II colloidal quantum dots synthesized by layer-by-layer colloidal epitaxy.

Shimon Weiss, Xavier Michalet, James M Tsay, 2005, Chemical physics.

Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2018, Science.

Particle size, surface coating, and PEGylation influence the biodistribution of quantum dots in living mice.

Robert Sinclair, Sanjiv S Gambhir, Shimon Weiss, 2008, Small.

Femtomole mixer for microsecond kinetic studies of protein folding.

Shimon Weiss, Xavier Michalet, Juan G Santiago, 2004, Analytical chemistry.

Synthesis and Properties of Biocompatible Water-Soluble Silica-Coated CdSe/ZnS Semiconductor Quantum Dots†

Shimon Weiss, Wolfgang J. Parak, Daniele Gerion, 2001 .

The ultrafast response of a scanning tunneling microscope

Shimon Weiss, Daniel S. Chemla, M. Salmeron, 1995 .

Hybrid approach to the synthesis of highly luminescent CdTe/ZnS and CdHgTe/ZnS nanocrystals.

Shimon Weiss, Malte Pflughoefft, Laurent A Bentolila, 2004, Journal of the American Chemical Society.

Site‐specific labeling of proteins for single‐molecule FRET by combining chemical and enzymatic modification

Shimon Weiss, Eyal Nir, Marcus Jäger, 2006, Protein science : a publication of the Protein Society.

Phasor imaging with a widefield photon-counting detector.

Shimon Weiss, Xavier Michalet, Anton S Tremsin, 2012, Journal of biomedical optics.

Photon Arrival-Time Interval Distribution (PAID): A Novel Tool for Analyzing Molecular Interactions

Shimon Weiss, Ted A. Laurence, Achillefs N. Kapanidis, 2004 .

Properties of Fluorescent Semiconductor Nanocrystals and their Application to Biological Labeling

Shimon Weiss, Xavier Michalet, Maxime Dahan, 2001 .

The transcription bubble of the RNA polymerase-promoter open complex exhibits conformational heterogeneity and millisecond-scale dynamics: implications for transcription start-site selection.

Shimon Weiss, Yusdi Santoso, Timothy D Craggs, 2013, Journal of molecular biology.

Quantum Dots for In Vivo Small-Animal Imaging

Shimon Weiss, Laurent A. Bentolila, S. Weiss, 2009, Journal of Nuclear Medicine.

Four-color alternating-laser excitation single-molecule fluorescence spectroscopy for next-generation biodetection assays.

Shimon Weiss, Taiho Kim, Ted A Laurence, 2012, Clinical chemistry.

Using photon statistics to boost microscopy resolution.

Shimon Weiss, Xavier Michalet, S. Weiss, 2006, Proceedings of the National Academy of Sciences of the United States of America.

TEMPORAL FLUCTUATIONS OF FLUORESCENCE RESONANCE ENERGY TRANSFER BETWEEN TWO DYES CONJUGATED TO A SINGLE PROTEIN

Shimon Weiss, Peter G. Schultz, Taekjip Ha, 1999 .

A Quantitative Theoretical Framework For Protein-Induced Fluorescence Enhancement–Förster-Type Resonance Energy Transfer (PIFE-FRET)

Shimon Weiss, Eitan Lerner, Johannes Hohlbein, 2016, The journal of physical chemistry. B.

Three-color alternating-laser excitation of single molecules: monitoring multiple interactions and distances.

Nam Ki Lee, Shimon Weiss, Younggyu Kim, 2007, Biophysical journal.

Bioactivation and cell targeting of semiconductor CdSe/ZnS nanocrystals with phytochelatin-related peptides.

Shimon Weiss, Fabien Pinaud, F. Pinaud, 2004, Journal of the American Chemical Society.

Markov State Models of Millisecond Folder ACBP Reveals New Views of the Folding Reaction

Vijay S. Pande, Shimon Weiss, Vincent A. Voelz, 2011 .

Single Molecule Quantum-Confined Stark Effect Measurements of Semiconductor Nanoparticles at Room Temperature

Shimon Weiss, Dan Oron, Zvicka Deutsch, 2012, ACS nano.

Labeling Cytosolic Targets in Live Cells with Blinking Probes.

Shimon Weiss, Thomas Dertinger, Marcel Bruchez, 2013, The journal of physical chemistry letters.

Shot-noise limited single-molecule FRET histograms: comparison between theory and experiments.

Shimon Weiss, Xavier Michalet, Yevgeniy Kovchegov, 2006, The journal of physical chemistry. B.

The power and prospects of fluorescence microscopies and spectroscopies.

Shimon Weiss, Xavier Michalet, Malte Pflughoefft, 2003, Annual review of biophysics and biomolecular structure.

Fluorescent probes and bioconjugation chemistries for single-molecule fluorescence analysis of biomolecules

Shimon Weiss, Achillefs N. Kapanidis, S. Weiss, 2002 .

Ultrafast scanning probe microscopy

Shimon Weiss, Miquel Salmeron, Daniel S. Chemla, 1993 .

Multispot single-molecule FRET: High-throughput analysis of freely diffusing molecules

Francesco Panzeri, Antonino Ingargiola, Angelo Gulinatti, 2016, bioRxiv.

High-throughput FCS using an LCOS spatial light modulator and an 8 × 1 SPAD array

Angelo Gulinatti, Ivan Rech, Massimo Ghioni, 2010, Biomedical optics express.

Advances in ultrafast scanning tunneling microscopy

Shimon Weiss, Daniel S. Chemla, D. F. Ogletree, 1996 .

SOFI-based 3D superresolution sectioning with a widefield microscope

Shimon Weiss, Thomas Dertinger, S. Weiss, 2012, Optical Nanoscopy.

Enhanced Absorption Induced by a Metallic Nano-Shell

Shimon Weiss, Roi Baer, R. Baer, 2003 .

Far-Field Super-resolution Detection of Plasmonic Near-Fields.

Shimon Weiss, Daniel Neuhauser, D. Neuhauser, 2016, ACS nano.

Advances in fluorescence imaging with quantum dot bio-probes.

Shimon Weiss, Xavier Michalet, Laurent A Bentolila, 2006, Biomaterials.

Sparsity-based super-resolution optical fluctuation imaging

Yonina C. Eldar, Shimon Weiss, Mordechai Segev, 2016, 2016 Conference on Lasers and Electro-Optics (CLEO).

Characterizing highly dynamic conformational states: the transcription bubble in RNAP-promoter open complex as an example

Antonino Ingargiola, Shimon Weiss, Eitan Lerner, 2017, bioRxiv.

Monte Carlo Diffusion-Enhanced Photon Inference: Distance Distributions and Conformational Dynamics in Single-Molecule FRET.

Antonino Ingargiola, Shimon Weiss, Eitan Lerner, 2018, The journal of physical chemistry. B.

Ruggedness in the folding landscape of protein L

Shimon Weiss, Shuhuai Yao, Lisa J Lapidus, 2008, HFSP journal.

Protein–protein interactions as a tool for site‐specific labeling of proteins

Shimon Weiss, Xavier Michalet, Marcus Jäger, 2005, Protein science : a publication of the Protein Society.

48-spot single-molecule FRET setup with periodic acceptor excitation.

Antonino Ingargiola, Angelo Gulinatti, Ivan Rech, 2018, The Journal of chemical physics.

Dual-molecule spectroscopy: molecular rulers for the study of biological macromolecules

Shimon Weiss, Taekjip Ha, Daniel S. Chemla, 1996 .

Moments reconstruction and local dynamic range compression of high order Superresolution Optical Fluctuation Imaging

Shimon Weiss, Atsushi Miyawaki, Xiyu Yi, 2018 .

Different types of pausing modes during transcription initiation

Antonino Ingargiola, Shimon Weiss, Xavier Michalet, 2017, Transcription.

Superresolution optical fluctuation imaging (SOFI).

Shimon Weiss, Mike Heilemann, Thomas Dertinger, 2012, Advances in experimental medicine and biology.

Periodic acceptor excitation spectroscopy of single molecules

Shimon Weiss, Xavier Michalet, Mike Heilemann, 2007, European Biophysics Journal.

Evidence for a thermal contribution to emission intermittency in single CdSe/CdS core/shell nanocrystals

Shimon Weiss, Uri Banin, Taekjip Ha, 1999 .

Alternating-laser excitation of single molecules.

Nam Ki Lee, Shimon Weiss, Emmanuel Margeat, 2005, Accounts of chemical research.

Design Rules for Membrane-Embedded Voltage-Sensing Nanoparticles

Shimon Weiss, Kyoungwon Park, S. Weiss, 2017, Biophysical journal.

Ultrafast Scanning Probe Microscopy: Towards Ultrafast Movies of Moving Atoms

Shimon Weiss, S. Weiss, 1994 .

Multispot single-molecule FRET: High-throughput analysis of freely diffusing molecules

Francesco Panzeri, Antonino Ingargiola, Angelo Gulinatti, 2016, bioRxiv.

Single molecule spectroscopy with automated positioning

Shimon Weiss, Taekjip Ha, Daniel S. Chemla, 1997 .

Characterization of Porous Materials by Fluorescence Correlation Spectroscopy Super-resolution Optical Fluctuation Imaging.

Shimon Weiss, Bo Shuang, Daniel A. Higgins, 2015, ACS nano.

microPET-Based Biodistribution of Quantum Dots in Living Mice

Sanjiv S Gambhir, Shimon Weiss, Zhen Cheng, 2007, Journal of Nuclear Medicine.

Tracking bio‐molecules in live cells using quantum dots

Shimon Weiss, Joshua Antelman, Fabien Pinaud, 2008, Journal of biophotonics.

Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins.

Shimon Weiss, Marcus Jäger, Ted A Laurence, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Singlet oxygen production by Peptide-coated quantum dot-photosensitizer conjugates.

Shimon Weiss, James M Tsay, Matthias Selke, 2007, Journal of the American Chemical Society.

Initial Transcription by RNA Polymerase Proceeds Through a DNA-Scrunching Mechanism

Shimon Weiss, Achillefs N. Kapanidis, Emmanuel Margeat, 2006, Science.

Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers

Shimon Weiss, Eitan Lerner, Johannes Hohlbein, 2016, Scientific Reports.

Single-Molecule Spectroscopy Comes of Age

Shimon Weiss, Xavier Michalet, S. Weiss, 2001, Science.

Toward Ultrafast Movies of Moving Atoms

Shimon Weiss, Miquel Salmeron, Daniel S. Chemla, 1993 .

Dynamic Partitioning of a Glycosyl‐Phosphatidylinositol‐Anchored Protein in Glycosphingolipid‐Rich Microdomains Imaged by Single‐Quantum Dot Tracking

Shimon Weiss, Xavier Michalet, Fabien Pinaud, 2009, Traffic.

Superresolution optical fluctuation imaging with organic dyes.

Shimon Weiss, Mike Heilemann, Thomas Dertinger, 2010, Angewandte Chemie.

Wide-field time-gated SPAD imager for phasor-based FLIM applications

Edoardo Charbon, Shimon Weiss, Xavier Michalet, 2019, bioRxiv.

Design consideration in an ultrafast scanning tunneling microscope

Shimon Weiss, Daniel S. Chemla, D. F. Ogletree, 1995 .

Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy

Shimon Weiss, S. Weiss, 2000, Nature Structural Biology.

Cys-diabody quantum dot conjugates (immunoQdots) for cancer marker detection.

Sanjiv S Gambhir, Shimon Weiss, Jianqing Li, 2009, Bioconjugate chemistry.